Part of scaffold_46 (Scaffold)

For more information consult the page for scaffold_46 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNX13 ENSTTRG00000003083 (Bottlenosed dolphin)

Gene Details

sorting nexin 13

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002892, Bottlenosed dolphin)

Protein Percentage 88.54%
cDNA percentage 88.78%
Ka/Ks Ratio 0.19129 (Ka = 0.0098, Ks = 0.0511)

SNX13 ENSBTAG00000014074 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018702, Cow)

Protein Percentage 75.95%
cDNA percentage 79.86%
Ka/Ks Ratio 0.36918 (Ka = 0.1878, Ks = 0.5088)

SNX13  (Minke Whale)

Gene Details

sorting nexin 13

External Links

Gene match (Identifier: BACU000467, Minke Whale)

Protein Percentage 98.34%
cDNA percentage 98.53%
Ka/Ks Ratio 0.26598 (Ka = 0.0093, Ks = 0.0351)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2526 bp    Location:1641578..1735703   Strand:+
>bmy_01838
ATGAAACGGGAAGCCAGGACTATAAGGATCGATAGAAGATTGACAGGTGCCAATATAATTGATGAACCTCTCCAGCAAGTTATCCAGTTTTCCTTGAGGGATTATGTCCAGTATTGGTATTATACACTAAGTGATGATGAATCTTTTCTTCTTGAAATTAGGCAGGCTCTTCAGAATGCACTCGTTCAGTTTGCTACTAGGTCAAAAGAAATAGACTGGCAACCTTACTTTACTACACGCATTGTAGATGATTTTGGCACACACCTACGAGTATTCAGAAAGGCTCAACAGAAGATAACAGAGAAAGATGATCAAGTAAAAGGTACAGCAGAAGATCTTGTAGATACCTTCTTTGAAGTTGAAGTTGAAATGGAGAAGGACGTTTGCCGTGACCTAGTGTGCACATCTCCCAAAGATGAAGAAGGTTTTCTTTTCAATTTAACTTTTTTGAGAACAATCCGTGATTCTAACTGCAACTATGAGGCCTTTATGAACATTATTAAATTGAGTGACAATATTGGAGAGCTAGAAGCAGTCCGAGATAAAGCAGCAGAAGAATTACAATATCTTCGATCTCTAGATACAGCTGGTGATGATATCAACACCATCAAAAATCAAATAAATAGCTTATTATTTGTAAAGAAAGTATGTGACTCAAGAATACAACGGTTGCAGTCAGGCAAGGAAATAAATACTGTGAAACTGGCAGCAAACTTCGGGAAACTTTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGTTGCACTACAATTTTTTATGGATTACATGCAACAAACTGGAGGTCAGGCACATCTCTTCTTCTGGATGACAGTGGAAGGATACCGGGTTACAGCCCAGCAACAGCTAGAAGTTTTATCAAGTCGTCAGAAAGATGGAAAACATCAAACCAACCAAACCAAAGGTCTTTTAAGAGCAGCTGCTGTTGGAATTTATGAACAGTATCTATCAGAAAAGGCATCTCCAAGAGTTACTGTTGATGATTATTTGGTAGCAAAATTAGCAGATACTTTGAATCATGAAGATCCAACTCCTGAAATCTTTGATGACATTCAAAGGAAGGTATATGAATTGATGCTACGAGATGAAAGATTTTATCCTTCCTTCAGACAGAATGCACTTTATGTGCGCATGTTAGCTGAGCTGGATATGTTAAAAGATCCTAGTTTCAGAGGATCAGATGATGGTGATGGAGAATCTTTTAATGGGTCTCCTACAGGAAGCATAAATTTGTCTTTAGATGACCTTTCAAATGTATCTTCTGATGACTCAGTACAACTTCATGCTTACATTTCAGACACTGTATATGCTGACTATGACCCATATGCTGTGGCAGGCGTTTGTAATGATCATGGCAAGACGTACGCATTATATGCCATCACTGTGCACCGGCGCAGTCTAAACAATGAGGAGATGTGGAAAACCTACCGTCGTTATAGTGACTTCCACGACTTCCACATGAGGATCACCGAACAGTTTGAAAATCTGTCAAGCATATTAAAGCTTCCCGGTAAAAAGACTTTTAATAATATGGATAGAGATTTTTTAGAAAAGAGAAAGAAGGATCTAAATGCATATTTGCAGTTACTGTTAACTCCTGAAATGATGAAAGCATCCCCAGCTTTGGCTCACTATGTGTATGATTTCCTTGAGAACAAAGCCTACAGTAAAGGGAAAGGGGATTTTGCTCGCAAGATGGACACTTTTGTAAATCCGCTTCGAAATTCTATGAGGAATGTTTCAAATGCAGTTAAATCCCTTCCTGATAGCTTGGCAGAGGGAATGACTAAAATGTCAGACAACATGGGCAAAATGTCAGAAAGATTAGGTCAAGACATAAGGCAATCATTTTTCAAGGTTCCTCCTTTAATTCCGAAGACTGATTCAGATCCTGAACATTGTCGAGTTTCAGCTCAACTTGATGATACTGTGGATGACAATATTCCACTTAGGGTAATGCTGCTTCTCATGGATGAAGTATTCGACTTAAAAGAGAGAAATCAGTGGTTGCGAAGGAATATCAAAAACCTACTTCAGCAGCTTATTAGAGCCACATATGGTGATACTATTAATAGAAAAATAGTTGACCATGTTGACTGGATGACCTCACCTGAGCAAGTAGCCGACTTAGTGAAACGTTTCAGAGATGCCTTTTGGCCAAATGGCATTTTAGCAGAGACTGTTCCATGCAGAGATAAAGCTATTCGAATGAGAACAAGAGTTGCAGGAAAAACTAAATTACTTTCAATTATGCCAGATGAACTGAAGCACATTATTGGGGCTGAGACAACACGGAAAGGTATTCTTCGTGTTTTTGAAATGTTTCAGCACAACCAGTTAAATAGGAGGATGGTTTATGTCTTTTTGGAAGGCTTTTTGGAAACCTTATTTCCACAGTATAAATTCCGTGAACTTTTCAACAGACTGCATTCACGGTCAAAGCAGATGCAGAAATATAAACAGAAACTTCAAACTACTCAAGCGCCTTCTTTACAGAAAAGGTGA

Related Sequences

bmy_01838T0 Protein

Length: 842 aa      View alignments
>bmy_01838T0
MKREARTIRIDRRLTGANIIDEPLQQVIQFSLRDYVQYWYYTLSDDESFLLEIRQALQNALVQFATRSKEIDWQPYFTTRIVDDFGTHLRVFRKAQQKITEKDDQVKGTAEDLVDTFFEVEVEMEKDVCRDLVCTSPKDEEGFLFNLTFLRTIRDSNCNYEAFMNIIKLSDNIGELEAVRDKAAEELQYLRSLDTAGDDINTIKNQINSLLFVKKVCDSRIQRLQSGKEINTVKLAANFGKLCTVPLDSILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVLSSRQKDGKHQTNQTKGLLRAAAVGIYEQYLSEKASPRVTVDDYLVAKLADTLNHEDPTPEIFDDIQRKVYELMLRDERFYPSFRQNALYVRMLAELDMLKDPSFRGSDDGDGESFNGSPTGSINLSLDDLSNVSSDDSVQLHAYISDTVYADYDPYAVAGVCNDHGKTYALYAITVHRRSLNNEEMWKTYRRYSDFHDFHMRITEQFENLSSILKLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLTPEMMKASPALAHYVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKSLPDSLAEGMTKMSDNMGKMSERLGQDIRQSFFKVPPLIPKTDSDPEHCRVSAQLDDTVDDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQVADLVKRFRDAFWPNGILAETVPCRDKAIRMRTRVAGKTKLLSIMPDELKHIIGAETTRKGILRVFEMFQHNQLNRRMVYVFLEGFLETLFPQYKFRELFNRLHSRSKQMQKYKQKLQTTQAPSLQKR*