Part of scaffold_47 (Scaffold)

For more information consult the page for scaffold_47 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000005085 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004780, Bottlenosed dolphin)

Protein Percentage 95.59%
cDNA percentage 96.83%
Ka/Ks Ratio 0.26679 (Ka = 0.022, Ks = 0.0825)

ITFG3 ENSBTAG00000016571 (Cow)

Gene Details

Protein ITFG3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022045, Cow)

Protein Percentage 78.26%
cDNA percentage 85.33%
Ka/Ks Ratio 0.18912 (Ka = 0.1106, Ks = 0.5846)

ITFG3  (Minke Whale)

Gene Details

integrin alpha FG-GAP repeat containing 3

External Links

Gene match (Identifier: BACU018974, Minke Whale)

Protein Percentage 97.46%
cDNA percentage 98.46%
Ka/Ks Ratio 0.30417 (Ka = 0.0111, Ks = 0.0364)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1677 bp    Location:1205367..1217268   Strand:+
>bmy_01861
ATGACGGACTGCAAGGACTTAGAAGCCGAGATCTACCCGCTGAAGAACGAGAACAGGAAGGTGCAGGAGCATCTGGGAAACCCAGCGGGAAAGGAAACCAGCGTGAAGCCGCCCCCGCGGTCCCGCCTCTCCCGGTGCCGGATGGTGGCCTTTTTTCTTTCGCTGTTCGTCTGCCTTTTCGTGGTGTTCGTGGTTTCCTTCATCATCCCATGTCCAGACCGGCCGGCGTCACAGGGGGTGTGGAGGATCGATTACGAGGCAGCAGTCGCCTATGACTTTCTGGCCACAGAAGACGTGAACAAGGACAGGATCCAGGATGTTCTCTTTCTTTATAAAAACACCAACAGCAGCAGAAGCAATTTCAGCCTCTCCTGTGCTGATGAAGGCTTTTCCTCCCCCTGCACCTTTGTGGCCGCTGTGTCGGGGGCCAACGGCACCGTCCTCTGGGAGAGGCCCGTGGCCCAGAACAGGGCCCTCGTGGAGTGCGGTGTCCCCCAGCCGAGGGGCAGCGGGGTGTCTTCTGCCTGCATCATCCTCGGCAGACCTGGCCCTTTCATTGCAGTAGACTCGGTCACAGGGGAGACCCTGTGGAGCCATCCCAGCAGCTTCGGGGGGAACGTGTCTGTCCTGAGCCCTCTGCTCCAGGTGCCCGACATCGATGCTGACGGGGTCCCAGACCTGCTGGTCCTCACCCAGGAGGAGAACCAGGTCAACGGCTACGTCTATTCAGGCAGCACCGGGCAGCAAGTCGGCCCCCCGGGCAGCCTGGGTGTGGACGGGACCAGCGGCTCCATCCTCTATGTCACCAGTGCAGGTGCCCACTACGTCCTCATCCCCTGCGGCACCTCCCTCTGCAGCCACTCAGTGAAGGGCCTGTATGAGAAGGCCACCGGGAGGGACAGCTCGCTCAAGAGCGACCCCCTCTGGGAGGGCAGGCTCAACGCCACCTCCCACAGGCTGCAGGAGCACAGCTTGGGAGCTGTCCGCTACCTGATGAACGTTCCGGGGAAGGTGGGTGAGGACCTGCTTCTCGTGAGTGCCGAGGCCTGCGTGCTGCTGGACGGGCAGGAGCTGGTGCCCAGGTGGACCCTCGGTGCAGCCCAGGTCCTGAGAAAACCCATCCTCGGCTACTACAAACCCGACACCCCGGCCATGGTCATTGAGAACGGGACCGGCTCCAAGAGACAGATCCTGCTCCTGGACCTCAGCTCCGGGGCTGTCCTGTGGAGCCAGGCCCTCCCAGGCCTCCCCAGGGACCCGCGCTCCGCCAGCCTGCCCACCGCAGACCACCGCTCCGCCTTCTTCTTCTGGGGCCTCCACGAGCTGGCTGGTGCCAACCAGACAGTACAGTCTTGGGTCCTGGAGCCCGGAGCTGCCGGGCACCGCCTGTACATGTTCCACCCCACGCTGCCCGGAGTCCTGCTGGAACTGGCCAACATCTCCACCCGCATTGTCACCTTCCAGGTGGTTCTGCTTGAGCCGAGCCGCCACGCTGCCTACATTCTCCTGACGGGCCCGGCCAGCCCGGATCCACCCGGCCTGGTCTCCGTGGCCAAACACAAGGTGCGGGACCTCATCCCGAGCAGCAAGGTAGTCCGCCTGGCTGAGGGTGGCCCCGACAGCGACCAGGCCGTCAGGGACCGGTTCTCTCGCCTACGGTACCGGAATGAGGCCTAG

Related Sequences

bmy_01861T0 Protein

Length: 559 aa      View alignments
>bmy_01861T0
MTDCKDLEAEIYPLKNENRKVQEHLGNPAGKETSVKPPPRSRLSRCRMVAFFLSLFVCLFVVFVVSFIIPCPDRPASQGVWRIDYEAAVAYDFLATEDVNKDRIQDVLFLYKNTNSSRSNFSLSCADEGFSSPCTFVAAVSGANGTVLWERPVAQNRALVECGVPQPRGSGVSSACIILGRPGPFIAVDSVTGETLWSHPSSFGGNVSVLSPLLQVPDIDADGVPDLLVLTQEENQVNGYVYSGSTGQQVGPPGSLGVDGTSGSILYVTSAGAHYVLIPCGTSLCSHSVKGLYEKATGRDSSLKSDPLWEGRLNATSHRLQEHSLGAVRYLMNVPGKVGEDLLLVSAEACVLLDGQELVPRWTLGAAQVLRKPILGYYKPDTPAMVIENGTGSKRQILLLDLSSGAVLWSQALPGLPRDPRSASLPTADHRSAFFFWGLHELAGANQTVQSWVLEPGAAGHRLYMFHPTLPGVLLELANISTRIVTFQVVLLEPSRHAAYILLTGPASPDPPGLVSVAKHKVRDLIPSSKVVRLAEGGPDSDQAVRDRFSRLRYRNEA*