Part of scaffold_47 (Scaffold)

For more information consult the page for scaffold_47 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RAB11FIP3 ENSTTRG00000009182 (Bottlenosed dolphin)

Gene Details

RAB11 family interacting protein 3 (class II)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008706, Bottlenosed dolphin)

Protein Percentage 93.28%
cDNA percentage 93.72%
Ka/Ks Ratio 0.15539 (Ka = 0.0402, Ks = 0.2585)

RAB11FIP3 ENSBTAG00000016591 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022068, Cow)

Protein Percentage 89.55%
cDNA percentage 88.12%
Ka/Ks Ratio 0.06936 (Ka = 0.06, Ks = 0.8652)

RAB11FIP3  (Minke Whale)

Gene Details

RAB11 family interacting protein 3 (class II)

External Links

Gene match (Identifier: BACU009258, Minke Whale)

Protein Percentage 98.8%
cDNA percentage 99.06%
Ka/Ks Ratio 0.13821 (Ka = 0.0048, Ks = 0.0351)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1842 bp    Location:1402865..1442637   Strand:+
>bmy_01872
ATGGTTCTGGGTACTGTTGGCAGCATCTCCCCAGATGCCACCTGTGCCCTGGCTGGAGCTGTTGCTGGCACTCCAGAGGACCCGATGGCCCTTACTTTCAGCACCGCCCCTTGCAAGCCTCCTGCTTCTCTGAATGTGGTGAAGGACTTAACGAGGTACTTGGATCCCAGTGGGCTCGGCGTGATTAGTTTCGAAGACTTCTACCGAGGGATCACAGCGATCAGAAATGGAGCAGATCCCGACGGCCAGCTCTGCAGCGTCACGCCTGCCCCTGACGAGGAGCCGCCAGCCTGCCCCGAGGAGTTCGATGACTTCGCCAACGAGGTGACAGACAGCGCATACATGGGCTCCGAGAGCACCTACAGTGAGTGTGAGACCTTCACGGATGAGGACACAGGCACCCTGGTGCCCCCCGAATGCCTGGACGCCACGGAGGAGCCCGGCCACGGCGCCCTGCTGCTGCTCCCGGGCAGCCAGTCGGTCGTCACGGTGATAGGAGGCGAGGAGCATTTCGAGGACTATGGTGAGGGCAGTGAGGCGGAGCTGTCCCCAGAGACCCTCTGCAACGGGGAGCACGGCTGCAGAGACCCCGTCTTCCTCACCCCCAGCGCTGACCCGCTTGCCGCCAAGCTGCACAGCATCCTCACGGATGAGGCTTTTGAGTTTTACTGTAGCCAGTGCCACAAACAAATCAACCGCCTTGAGGATCTTTCTGCTCGCCTGAACGATCTTGAAAAGAATAGTCCATCGAAGCGGCTCTCCAGCAAGAAGGTGGCAAGGCACCTGCATCAGTCAGGGGCCCTGACCATGGAGGCCCTGCAGGACCCTCCCCCAGACCCCGTGGAGGGCATGGAAGAGGACATTGCTGACAAGGTTGTCTTCCTGGAGAAGCGAGTGTTGGAGCTGGAAAAGGACACGGCTGCCAACGGGGAGCAGCACAGCCGGCTGAGGCAGGAGAACCTCCAGCTGGTGCACAGAGCCAACGCCCTGGAGGAGCAGCTCAAGGAGCAGGAGCTGAGAGCCTGCGAGATGGTCCTGGAGGAGACACGCAAGCAGAAGGAGCTCCTGTGCAAGATGGAGCGAGAGAAGAGCATCGAGATCGAGAACCTGCAGGCCAGGCTGCAGCAGCTGGACGAGGAGAACAGTGAGCTGAGGTCCTGCACGCCCTGCCTGAAGGCCAGCATCGAGCGCCTGGAGGAGGAGAAGCAGAAGCTGCTGGATGAGATTGAGGAGCTGTCGCTGCGGCTCAGTGAGGAACAGGAGAACAGGAGGAAGCTGGGGGACAGGCTGAGCCACGAGAGGCACCAGTTCCAGAGGGACAAGGAGGCGACCCAGGAGGTGAGCACAGAGCCCCGGGGTCCCCCCCCCCATTGGCGTTCAGACCGCCCCAGAGGTCCTGAAGCCAAGCTGAGCCAACCCCCGCTGCTGCAGCTGATCGAGGACCTGCGCAAGCAGCTGGAGCATCTGCAGCTCTTCAAGCTGGAGGCCGAGCAGAGGAGGGGCCGCAGCAGCAGCGCAGGCCTGCAGGAGTACAACAGCCGCACGCGGGAGAGTGAGCTGGAGCAGGAGGTCCGGAGGCTGAAGCAGGACAACCGCAGCCTGAAGGAGCAGAATGACGAGCTCAACGGGCAGATCATCAACCTGAGCATCCAGGGCGCCAAGAATCTCTTCTCCACGGCCTTCTCCGAGTCTCTGGCCGCAGAGATCAGCTCCGTCTCCCGAGACGAGCTCATGGACGCCATCCAGAAGCAGGAGGAGATCAACTTCCGCCTGCAGGACTACATCGACAGGATCATCGTGGCCATCATGGAGACCAACCCGTCCATCCTGGAGGTCAAGTAG

Related Sequences

bmy_01872T0 Protein

Length: 614 aa      View alignments
>bmy_01872T0
MVLGTVGSISPDATCALAGAVAGTPEDPMALTFSTAPCKPPASLNVVKDLTRYLDPSGLGVISFEDFYRGITAIRNGADPDGQLCSVTPAPDEEPPACPEEFDDFANEVTDSAYMGSESTYSECETFTDEDTGTLVPPECLDATEEPGHGALLLLPGSQSVVTVIGGEEHFEDYGEGSEAELSPETLCNGEHGCRDPVFLTPSADPLAAKLHSILTDEAFEFYCSQCHKQINRLEDLSARLNDLEKNSPSKRLSSKKVARHLHQSGALTMEALQDPPPDPVEGMEEDIADKVVFLEKRVLELEKDTAANGEQHSRLRQENLQLVHRANALEEQLKEQELRACEMVLEETRKQKELLCKMEREKSIEIENLQARLQQLDEENSELRSCTPCLKASIERLEEEKQKLLDEIEELSLRLSEEQENRRKLGDRLSHERHQFQRDKEATQEVSTEPRGPPPHWRSDRPRGPEAKLSQPPLLQLIEDLRKQLEHLQLFKLEAEQRRGRSSSAGLQEYNSRTRESELEQEVRRLKQDNRSLKEQNDELNGQIINLSIQGAKNLFSTAFSESLAAEISSVSRDELMDAIQKQEEINFRLQDYIDRIIVAIMETNPSILEVK*