Part of scaffold_47 (Scaffold)

For more information consult the page for scaffold_47 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RAB40C ENSTTRG00000009228 (Bottlenosed dolphin)

Gene Details

RAB40C, member RAS oncogene family

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008748, Bottlenosed dolphin)

Protein Percentage 85.05%
cDNA percentage 87.66%
Ka/Ks Ratio 0.28054 (Ka = 0.1022, Ks = 0.3645)

RAB40C ENSBTAG00000007880 (Cow)

Gene Details

ras-related protein Rab-40C

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010364, Cow)

Protein Percentage 85.41%
cDNA percentage 83.51%
Ka/Ks Ratio 0.09231 (Ka = 0.0983, Ks = 1.0652)

RAB40C  (Minke Whale)

Gene Details

RAB40C, member RAS oncogene family

External Links

Gene match (Identifier: BACU009255, Minke Whale)

Protein Percentage 85.41%
cDNA percentage 88.14%
Ka/Ks Ratio 0.30397 (Ka = 0.1007, Ks = 0.3311)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 867 bp    Location:1521684..1534636   Strand:+
>bmy_01877
ATGACGTGGGCCGATGCTGAGACCAGCTGCCCTCCCTTTGGCCGGTGCCATTGGTACCTGGCTTGGGCCTCTGGGGTGACAGGAGGGTGGCCAGCTGGGGTCGCTGGGCTCCCTGGGCTGGAGCCACACTTCCGCTTGGCTTCAGGGACTGGGCCCTGGCCAGGGATCGACTACAAGACCACCACCATCCTGCTGGACGGCCGGCGGGTCAAGCTGGAACTCTGGGACACATCGGGCCAGGGCAGGTTCTGCACCATCTTCAGGTCCTACTCCAGGGGCGCACAGGGGATCCTTCTGGTGTATGACATCACCAACCGCTGGTCCTTCGACGGCATTGACCGGTGGATCAAGGAGATCGATGAGCACGCTCCCGGGGTCCCCCGGATCCTGGTTGGGAACCGGCTGCACCTGGCCTTCAAGCGGCAAGTCCCGACAGAGCAGGCGCGTGCCTACGCGGAGAAGAACTGCATGACCTTCTTCGAGGTCAGCCCACTGTGCAACTTCAATGTCATCGAGTCCTTCACCGAACTGTCCCGCATCGTCCTTATGCGGCACGGCATGGAGAAGATCTGGAGGCCCAACCGAGTGTTCAGTCTGCAGGACCTCTGCTGCCGGGCCATCGTTTCCTGCACCCCCGTGCACCTCATCGACAAGCTCCCGCTTCCTGTCACCATCAAGAGCCACCTCAAGTCCTTCTCGATGGCCAATGGCATGAACGCTGTTATGATGCACGGGCGCTCCTACTCACTGGCTAGTGGAGCAGGGGGCGGCGGCAGCAAGGGCAACAGCCTCAAGCGGTCCAAGTCCATCCGACCACCCCAGAGCCCACCCCAGAACTGCTCGCGGAGCAACTGCAAGATCTCCTAG

Related Sequences

bmy_01877T0 Protein

Length: 289 aa      View alignments
>bmy_01877T0
MTWADAETSCPPFGRCHWYLAWASGVTGGWPAGVAGLPGLEPHFRLASGTGPWPGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKIWRPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSMANGMNAVMMHGRSYSLASGAGGGGSKGNSLKRSKSIRPPQSPPQNCSRSNCKIS*