Part of scaffold_47 (Scaffold)

For more information consult the page for scaffold_47 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RHBDL1 ENSTTRG00000004074 (Bottlenosed dolphin)

Gene Details

rhomboid, veinlet-like 1 (Drosophila)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003837, Bottlenosed dolphin)

Protein Percentage 86.82%
cDNA percentage 87.58%
Ka/Ks Ratio 0.25903 (Ka = 0.0955, Ks = 0.3688)

RHBDL1 ENSBTAG00000017284 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022975, Cow)

Protein Percentage 99.67%
cDNA percentage 94.99%
Ka/Ks Ratio 0.00364 (Ka = 0.0014, Ks = 0.3819)

RHBDL1  (Minke Whale)

Gene Details

rhomboid, veinlet-like 1 (Drosophila)

External Links

Gene match (Identifier: BACU009250, Minke Whale)

Protein Percentage 97.59%
cDNA percentage 97.5%
Ka/Ks Ratio 0.26544 (Ka = 0.0169, Ks = 0.0637)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1209 bp    Location:1578038..1580224   Strand:+
>bmy_01883
ATGTGGGCACAGGGGCCTAGACCCAGGATGCTCGGAGCCTGCCTCTCCCTCCTGACGTGGCTCAGCCCTGTGGTCGTGGGGCTCGGCCCACCCTCAGACCTTGGCCGCTGGCCCCCCCGACCCCAGCAGCTGGACCCTGAGAACACAGGCTTCATCGGTGCGGACACCTTCACTGGCCTGGTGCACCGCCATGAGCTGCCCCTGGACCCGGCCAAACTGGACATGCTGGTGGCCCTGGCCCAGAGCAACGAGCGGGGGCAGGTCTGCTACCAGGAGCTGGTGGACCTGATCAGCAGCAAGCGCTCAAGCAGCTTCAAGCGGGCCATCGCCAATGGACAGCGGGCACTGCCCCAGGATGGGCTGCTGGACGAGCCAGGCCTGGGTGTCTACAAGCGGTTCGTGCGCTACGTGGCCTACGAGATCCTGCCCCGAGAGGTGGACCGCCACTGGTACTTCTACCGGCACCGCAGCTGCCCACCCCCCGTGTTTATGGCTTCGGTCACCCTCGCCCAGATCATCGTGTTCCTGTGCTACGGAGCCCGTCTCAACAAGTGGGTGCTGCAGACCTACCACCCTGAGTACATGAAAAGCCCCCTCGTATACCACCCCGGCCACCGTGCTCGGGCCTGGCGCTTTCTCACCTACATGTTCATGCACGTTGGGCTGGAGCAGCTGGGGTTCAACGCACTCCTGCAGCTGATGATCGGGGTGCCCCTGGAGATGGTGCATGGCCTGCTCCGCATCAGCCTGCTCTACCTGGCTGGTGTGCTGGCAGGCTCCCTGACCGTCTCCATTACTGACATGCGGGCCCCTGTGGTGGGGGGCTCCGGCGGGGTCTACGCCCTGTGCTCTGCACACCTGGCCAATGTCGTCATGAACTGGGCTGGGATGAGATGTCCCTACAAGCTGCTGAGGATGGTGCTGGCCCTGGTGTGCATGAGCTCCGAGGTGGGCCGGGCCGTGTGGCTGCGCTTCTCCCCGCCACTGCCTGCCTCGGGCCCACAGCCCAGCTTCATGGCACACCTGGCGGGCGCAGTGGTGGGTGTCAGCATGGGCCTGACCATCCTGCGCAGCTACGAGGAGCGCCTGCGAGACCAGTGTGGCTGGTGGGTGGTGCTGCTTGCCTATGGCACCTTCTTGCTCTTCGCCATCTTCTGGAACATCTTTGCCTACGACCTGCTGGGTGCCCACATTCCCCCGCCACCCTGA

Related Sequences

bmy_01883T0 Protein

Length: 403 aa      View alignments
>bmy_01883T0
MWAQGPRPRMLGACLSLLTWLSPVVVGLGPPSDLGRWPPRPQQLDPENTGFIGADTFTGLVHRHELPLDPAKLDMLVALAQSNERGQVCYQELVDLISSKRSSSFKRAIANGQRALPQDGLLDEPGLGVYKRFVRYVAYEILPREVDRHWYFYRHRSCPPPVFMASVTLAQIIVFLCYGARLNKWVLQTYHPEYMKSPLVYHPGHRARAWRFLTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGLLRISLLYLAGVLAGSLTVSITDMRAPVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRFSPPLPASGPQPSFMAHLAGAVVGVSMGLTILRSYEERLRDQCGWWVVLLAYGTFLLFAIFWNIFAYDLLGAHIPPPP*