Sequence detailsbmy_01889 (Coding sequence)

Part of scaffold_47 (SequenceType object (1))

For more information consult the page for scaffold_47 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FAM173AENSTTRG00000004091 (Bottlenosed dolphin)

Gene Details

family with sequence similarity 173, member A

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003852, Bottlenosed dolphin)

Protein Percentage 93.29%
cDNA percentage 94.63%
Ka/Ks Ratio 0.29406 (Ka = 0.0371, Ks = 0.1262)

FAM173AENSBTAG00000002467 (Cow)

Gene Details

protein FAM173A

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000003200, Cow)

Protein Percentage 87.25%
cDNA percentage 89.49%
Ka/Ks Ratio 0.17772 (Ka = 0.0653, Ks = 0.3674)

FAM173A (Minke Whale)

Gene Details

family with sequence similarity 173, member A

External Links

Gene match (Identifier: BACU018843, Minke Whale)

Protein Percentage 93.29%
cDNA percentage 95.08%
Ka/Ks Ratio 0.3475 (Ka = 0.0368, Ks = 0.1058)

Additional orthologs identified in other species via the OPTIC pipeline.

FAM173A (Human)   Fam173a (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 450 bp    Location:1613851..1618770   Strand:+
Raw sequence 
>bmy_01889
ATGGAGCAGGACGACCCGGCCGAGGCGTTGACGGAGCTGCGCGAGCGGCGGCTAGGCGCGTTGGAGCTGCTGCAGGTGGCGGCGGGCTCGGGCCTGGTCGCCTACGCCGTGTGGGCGCTGCTGCTGCAGCCGGGCTTCCGCCGCGTGCCGCTGCGGCTGCAGGTGCCTTATGTTGGCGCGAGTGCCAGGCAGGTGGAGCACGTGTTGTCGTTGCTGCGAGGCCGTCCAGGAAAGATGGTGGACCTGGGCTCTGGCGACGGCAGGATTGTGCTGGCTGCCCACAAGTGCGGTCTCCGCCCAGCTGTGGGCTATGAGCTGAACCCGTGGCTGGTGGGGCTGGCGTGGCTGCATGCCTGGAGGGCAGGATGTGTGGGCAATGTCAGCTACCACCGTGAGAACCTCTGGAAGGTAATCCAGGGAGTCCTGGACCCCCTCAGACCCCACCCCTGA

Related Sequences

bmy_01889T0 SequenceType object (3)

Length: 150 aa      View alignments
>bmy_01889T0
MEQDDPAEALTELRERRLGALELLQVAAGSGLVAYAVWALLLQPGFRRVPLRLQVPYVGASARQVEHVLSLLRGRPGKMVDLGSGDGRIVLAAHKCGLRPAVGYELNPWLVGLAWLHAWRAGCVGNVSYHRENLWKVIQGVLDPLRPHP*