Part of scaffold_47 (Scaffold)

For more information consult the page for scaffold_47 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC78 ENSTTRG00000004093 (Bottlenosed dolphin)

Gene Details

coiled-coil domain containing 78

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003854, Bottlenosed dolphin)

Protein Percentage 44.07%
cDNA percentage 55.12%
Ka/Ks Ratio 0.70238 (Ka = 0.7532, Ks = 1.0723)

CCDC78 ENSBTAG00000002470 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003211, Cow)

Protein Percentage 37.16%
cDNA percentage 51.86%
Ka/Ks Ratio 0.74671 (Ka = 0.9149, Ks = 1.2252)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1005 bp    Location:1622032..1619099   Strand:-
>bmy_01890
ATGGATGATGACCTGGTCACCCCGCAGGTCCTGTGGCTGGAGAGCCGGGTGCTGGAGCTAGAGCTGCACGGAGAGCAGGCAGCCCCAGCAGAAGCTGATCCGGGGCACCGCCAGGCACTGGCACAGGAGCTTGGGCACAAGGCCTGGGGGCAGGGACACTCCGACCTCCACAGACTCCAGGTCACCATGAGCGCATGGGTGGAAGCTAAACGGGTCCAGCAGGGGAACAGTGAGGCTGAGACCGGCTCTTCTGTGCAGGCACAGCCCAAGGACTTCCTGACCCCTGAGAATGAGCAGCAGAAACTGGGGGATGGTGTGACCGCAGGGAGAAGTAAATCGGGCGCCAGAGCAGCACAGGGCTCGGCAGCAGGCACTGGAGACGCGTGTGTGAGTGACTGCCTCACCTGGGACAGGAGGGCCCAGCAGGGCACAGTGAGCAAAGGAGCTGTTCTTAAGGGGCAGAAGGAGTCACCTGCCCTGGGCCCGGCTAAGCCTCATACCCATGTCTGCAGGGCAGCCCTGGGCTGGCAGCTGCAGGGAGCCCAGGAGGAGGCCAAGACAGCTGGGCAGCAACTGGCTGCACAAGCCTTGGTATTGTCTGCCTGCCGGGGCCAGCTCCACCAGGCTGAAGCAGAGAACGCCCGGCTGCAGCTGCAACTCAAGAAGCTGAACGAGGAGTACGCCATCCGACTGCAGCACTGCGCCCGAGCCGTGGCTGTGAGCACTGGGCCGGTTGGCCCTGTGTTGAGTGGGAGGCCTCTGGTCCTGGGGAGCCCGAGTCTGGCCTGGAAAGAACCCAGTGAAGCCTCTCAGGGGGGCCCATTAGAGCCACAGGGCCTGGAAGCTGCATCCTGGGCCCAGATCCGCCAGAAGCTACAGGACTTTTCCCGTGGCACCCAGGCAGAGCTGGAAAGGGAGAGAGCACAGCTTCTAGTCCGAGCCATGATGGCCGAGGAGCAACTTTCTGAGCTACAAGAGTACGTGGACCAGCACCTGGGCAGGTAG

Related Sequences

bmy_01890T0 Protein

Length: 335 aa      View alignments
>bmy_01890T0
MDDDLVTPQVLWLESRVLELELHGEQAAPAEADPGHRQALAQELGHKAWGQGHSDLHRLQVTMSAWVEAKRVQQGNSEAETGSSVQAQPKDFLTPENEQQKLGDGVTAGRSKSGARAAQGSAAGTGDACVSDCLTWDRRAQQGTVSKGAVLKGQKESPALGPAKPHTHVCRAALGWQLQGAQEEAKTAGQQLAAQALVLSACRGQLHQAEAENARLQLQLKKLNEEYAIRLQHCARAVAVSTGPVGPVLSGRPLVLGSPSLAWKEPSEASQGGPLEPQGLEAASWAQIRQKLQDFSRGTQAELERERAQLLVRAMMAEEQLSELQEYVDQHLGR*