Part of scaffold_47 (Scaffold)

For more information consult the page for scaffold_47 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NARFL ENSTTRG00000004097 (Bottlenosed dolphin)

Gene Details

nuclear prelamin A recognition factor-like

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003858, Bottlenosed dolphin)

Protein Percentage 97.59%
cDNA percentage 97.5%
Ka/Ks Ratio 0.13951 (Ka = 0.0108, Ks = 0.0777)

NARFL ENSBTAG00000002484 (Cow)

Gene Details

Cytosolic Fe-S cluster assembly factor NARFL

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003225, Cow)

Protein Percentage 93.28%
cDNA percentage 91.25%
Ka/Ks Ratio 0.07499 (Ka = 0.0311, Ks = 0.4146)

NARFL  (Minke Whale)

Gene Details

nuclear prelamin A recognition factor-like

External Links

Gene match (Identifier: BACU009245, Minke Whale)

Protein Percentage 98.95%
cDNA percentage 98.67%
Ka/Ks Ratio 0.12841 (Ka = 0.0055, Ks = 0.0431)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1737 bp    Location:1633907..1626491   Strand:-
>bmy_01892
ATGGCGTCGCTCTTCAGCGGGGCCTTGCAGCTGACGGACCTGGACGACTTCATCGCGCCGTCTCAGGATTGCATCAAGCCCATGAGGGTGGATAAGAGGCCGGGAAGCGGCGCGGCCAAGATCCACATCGAAGATGATGGGAGTTACTTCCAAGTCAGTCAGGATGGAGGGACGAAGAAGCTGGAGAGGGCCAAGATCTCGCTGGACGACTGCCTGGCGTGCAGTGGCTGCGTCACTTCGGCAGAGACCGTGCTCATCACTCAGCAGAGCCACGAGGAGCTGCGGAAGGTTCTAGGTGCTAATAAGATGGCAGCGCCCGATCAGCAGAGGCTGGTTGTCATCTCGGTCTCTCCCCAGTCCAGAGCGTCGCTGGCTGTGAGATTTCAGCTGAATCCTACAGACACCGCCAGGAAATTAACTGCATTCTTTAAAAAAATAGGGGCACACTACGTGTTTGATACCACCTTCTCGAGGAACTTCAGCCTCCTCGAGAGCCAGCGGGAGTTCGTGCGGCGATTCCGAGCACAGGCCGATTCCAAGCAGGCCTTGCCTGTGCTGACTTCCGCCTGCCCAGGCTGGATCTGCTACGCCGAGAAGACCCACGGGAACGTCCTCCTCCCCCACATCAGCACCGCCCGGTCCCCGCAGCAGGTCATGGGCTCCCTGGTCAAGGACTTCTTCTCCCAGCAGCAGGTAACAGGCACATCTTACAAAATGAGCCAAGACTGCAGTGGTCACGGACCCACACGCAGAACTGTGCTCCCAGCCGTGCCTGTGCTGTCACCCCCGCCTCAGCCTTTGCTGCTGGGGCCAGGCAGCTGCACCACTGCCGTGTTCTCCACGCAGCATTTGACCCCCGACAAGATCTACCATGTGACGGTGATGCCCTGCTACGACAAAAAGCTGGAAGCCTCCAGACCCGACTTCTTCAGCCAAGAGCACCAGACACGCGATGTGGATTGTGTCATCACAACAGGAGAAGTCTTCAAGCTGCTGGAAGAAGAAGGGGTCTCGCTGTCAGAGCTGGAGCCGGCTCCCCTGGACAGTCTGTACGTCGCGCCTGCCATGTCAGGGGCAGTAAGCTCGTCCAGCATTGGGGTGCTCTTGACCTTGGGGTCACTGATGTCCTGGTGGGCAGCAGAAGGGATGAGGCGGGGGCAGGCACTGTCCTCCCCCTTCTTCTCTGCCTCAGCTTCCTCCTGGTGCAGCAGTGTATCTGGCCAGGAGCCTACCAGCCATCAGGGTGGGGGCTCGGGGGGCTACCTGGAGCACGTGTTCCGGTATGCAGCCCAGGAGCTCTTTGGAATCCACGTCACTGAAGTCACCTACAGACCCCTGAGGAACAAGGACCTCCAGGAGGTGACTCTAGAGAGGGAGGGCCGGGTCCTGCTGCACTTCGCCGCGGCCTACGGCTTCCGCAACATCCAGAACCTGGTGCAAAAGCTGAAGCGAGGCCGCTGCCCATACCACTATGTGGAGGTCATGGCCTGCCCTTCAGGCTGCTTGAATGGTGGAGGCCAGCTCAAGGCCCCCGACATGCCTGGCAAGGAGCTTCTCCAGCAGGTTGAGAGGCTATACAGCATGGTCAGGACCGAGGCACCAGAAGACGCACCTGGGGTCCAGGAGCTGTATGGGCACTGGCTGCAGGGCGAGGGCTCAGAGCAGGCCAGCCGCCTGCTGCACACAAGCTACCACGCGGTGGAAAAGGCTGGCTCCAGCCTCAGCATCAGGTGGTAG

Related Sequences

bmy_01892T0 Protein

Length: 579 aa      View alignments
>bmy_01892T0
MASLFSGALQLTDLDDFIAPSQDCIKPMRVDKRPGSGAAKIHIEDDGSYFQVSQDGGTKKLERAKISLDDCLACSGCVTSAETVLITQQSHEELRKVLGANKMAAPDQQRLVVISVSPQSRASLAVRFQLNPTDTARKLTAFFKKIGAHYVFDTTFSRNFSLLESQREFVRRFRAQADSKQALPVLTSACPGWICYAEKTHGNVLLPHISTARSPQQVMGSLVKDFFSQQQVTGTSYKMSQDCSGHGPTRRTVLPAVPVLSPPPQPLLLGPGSCTTAVFSTQHLTPDKIYHVTVMPCYDKKLEASRPDFFSQEHQTRDVDCVITTGEVFKLLEEEGVSLSELEPAPLDSLYVAPAMSGAVSSSSIGVLLTLGSLMSWWAAEGMRRGQALSSPFFSASASSWCSSVSGQEPTSHQGGGSGGYLEHVFRYAAQELFGIHVTEVTYRPLRNKDLQEVTLEREGRVLLHFAAAYGFRNIQNLVQKLKRGRCPYHYVEVMACPSGCLNGGGQLKAPDMPGKELLQQVERLYSMVRTEAPEDAPGVQELYGHWLQGEGSEQASRLLHTSYHAVEKAGSSLSIRW*