Part of scaffold_47 (SequenceType object (1))

For more information consult the page for scaffold_47 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MSLNENSBTAG00000000177 (Cow)

Gene Details

mesothelin precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000000202, Cow)

Protein Percentage 73.31%
cDNA percentage 82.41%
Ka/Ks Ratio 0.5156 (Ka = 0.1786, Ks = 0.3464)

MSLN (Minke Whale)

Gene Details

mesothelin

External Links

Gene match (Identifier: BACU009244, Minke Whale)

Protein Percentage 88.49%
cDNA percentage 90.79%
Ka/Ks Ratio 0.37295 (Ka = 0.0768, Ks = 0.206)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 1005 bp    Location:1644893..1646808   Strand:+
>bmy_01893
AAGGCCTGCCCCCCGGGGCGGAAGGCCCAAGTGGTGGACGAAAACCTTGTCTTCTACGAGGAGTGGGAGCTGGAGGCTTGTGTGGACGGAGCCCTGCTGGCCGCTCAGATGGACCAGCGCAGTCTTCCCAGCTGCCCGGGGAGTGGCGGCGGCCCTCATAGTCCCTTCCCCCGGAAGGTCTACCCACAGGGGTACTCTGAGTCCCTGATCCAGCACCTGAGGTACTTCTTCCTTTGGGTGACCCCCGAGGACATCCACAAGTGGAATGTGACTTCCCTGGAGACCGTGAAATCTCTGCTCAAAGTTAGCAAAGGGCATGGGATGGATGCTCAGCCACTGAGTGGCCTCCTCCCACAGGTGGCCGCCCTCATTGCCCGCTATGTAGGGGGAGGGGGCCAGCTGGACAAGGCCACACTGGACACCCTGGCCACCTTCCCTGCTACCTACCTGTGCCTCCTCAGCCCTGAGCAGCTGGGCTTCATGCAGCTCAACGTTGTTTGGGCGACCAGGCCCCGGGACCTGGACACATGCAGCCCATGGCAGATGGCTGTCCTCTACCCCAAGGCCCGCATCACCTTCCAGAACATGAGCGGGTCTGAATACTTCACAAGGATCAAGCCCTACCTGGGTGGGGCCCCCACGGAGGACCTGCGGGCTCTCAGTCAGCAGAACATAAACATGGACGTGGCCACATTCAAGAAGCTGCGGAGAGAGGCTGTGCTGCCGCTGACAATTGCTGAGGTGCAGAAACTTCTGGGTGCAAACCTGGTAGGCCTGAAGGCTGAGGAGGGGAACAGCCCGCTGCGGGACTGGATCTCCCGGCAGTCGCAGGAGGACCTGGACAGTCTGGGGCTGGGGCTCCACGGCGGCACCCCCAACGGCTACCTGGTCCTGGACTTCAACGTCCGAGAGGCCTCCTCGGGAGGCCCTCACCTCCTCAGACTAGGACCTGGACCTGTGCTCACTGTGACCCCAAGTCTGCTCCTGGCCTTGATCCTGAACTGA

Related Sequences

bmy_01893T0 SequenceType object (3)

Length: 335 aa      View alignments
>bmy_01893T0
KACPPGRKAQVVDENLVFYEEWELEACVDGALLAAQMDQRSLPSCPGSGGGPHSPFPRKVYPQGYSESLIQHLRYFFLWVTPEDIHKWNVTSLETVKSLLKVSKGHGMDAQPLSGLLPQVAALIARYVGGGGQLDKATLDTLATFPATYLCLLSPEQLGFMQLNVVWATRPRDLDTCSPWQMAVLYPKARITFQNMSGSEYFTRIKPYLGGAPTEDLRALSQQNINMDVATFKKLRREAVLPLTIAEVQKLLGANLVGLKAEEGNSPLRDWISRQSQEDLDSLGLGLHGGTPNGYLVLDFNVREASSGGPHLLRLGPGPVLTVTPSLLLALILN*