Part of scaffold_47 (Scaffold)

For more information consult the page for scaffold_47 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LMF1 ENSTTRG00000005874 (Bottlenosed dolphin)

Gene Details

lipase maturation factor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005557, Bottlenosed dolphin)

Protein Percentage 89.53%
cDNA percentage 90.09%
Ka/Ks Ratio 0.13751 (Ka = 0.0433, Ks = 0.3149)

LMF1 ENSBTAG00000019745 (Cow)

Gene Details

Lipase maturation factor 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004206, Cow)

Protein Percentage 86.49%
cDNA percentage 86.6%
Ka/Ks Ratio 0.07496 (Ka = 0.0732, Ks = 0.9764)

LMF1  (Minke Whale)

Gene Details

lipase maturation factor 1

External Links

Gene match (Identifier: BACU009240, Minke Whale)

Protein Percentage 87.45%
cDNA percentage 89.54%
Ka/Ks Ratio 0.28632 (Ka = 0.0845, Ks = 0.2951)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 891 bp    Location:1720562..1715904   Strand:-
>bmy_01898
ATGCCTCTGGTGTGGACTCCACGCATCACTGTGGAGCACGTGAAATGCGGTGGCTGGAGGGATCTCTCTCTCCACCCCCAGATGGTCCTCATCATCAGCGGGAATCTGAGCTTCCTGAACTGGCTGACCATCGTGCCCAGCCTCGCCTGCTTCGATGACGCCACTCTGGGCTTCCTGTTTCCCTCGGGGCCCGGCTGCCTCAAGGACCAAGTCCTGAGGATGCAGGAGGAGGAAGCTCGAGGGGCCAGGGCCCCACGGACACGCGGCAGCGTGGCACGGCACACGGTCAACCTGGCGCTGGGCGTCCTGGTCGCCTGGCTCAGCGTCCCCGTGGTCCTCAACTTGCTGAGCCCCCGGCAGGTCATGAACAGCTCCTTCAACCCTCTCCGGATCGTCAACACATATGGGGCCTTCGGCAGCATCACCAAGGAGCGCACAGAGGTCATCCTGCAGGGCACCGCCAGCCCCAATGCCAGCGCGCCAGATGCCAAGTGGGAGGACTACGAGTTCAAGTGCAAGCCCGGTGACCTGAGGCGGCGGCCATGCCTCATCTCCCCGTACCACCACCGCCTGGACTGGCTTATGTGGTTCGCCGCCTTCCAGACCTACGAGCACAACGAGTGGATCATCCACCTGGCGGGCAAGCTCCTGGCCAACGACGCCCAGGCCCTATCCCTGCTGGCCCTTAACCCCTTCGCAGGCAGGGCACCCCCCAGGTGGGTCCGGGGAGAGCACTACAGGTACAAGTTCAGCCGCCCCGGGGGCACGCACGCTGCTGAGGGCAAGTGGTGGATCCGGAAGAGGCTCGGCCCCTACTTCCCCCCGCTCAGCTTCCAGGACCTGAAGGGCTACTTCAGGTCACGGGAGTGGCCGTACCCCAAACCCGAATAG

Related Sequences

bmy_01898T0 Protein

Length: 297 aa      View alignments
>bmy_01898T0
MPLVWTPRITVEHVKCGGWRDLSLHPQMVLIISGNLSFLNWLTIVPSLACFDDATLGFLFPSGPGCLKDQVLRMQEEEARGARAPRTRGSVARHTVNLALGVLVAWLSVPVVLNLLSPRQVMNSSFNPLRIVNTYGAFGSITKERTEVILQGTASPNASAPDAKWEDYEFKCKPGDLRRRPCLISPYHHRLDWLMWFAAFQTYEHNEWIIHLAGKLLANDAQALSLLALNPFAGRAPPRWVRGEHYRYKFSRPGGTHAAEGKWWIRKRLGPYFPPLSFQDLKGYFRSREWPYPKPE*