Sequence detailsbmy_01904 (Coding sequence)

Part of scaffold_47 (SequenceType object (1))

For more information consult the page for scaffold_47 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CACNA1HENSTTRG00000000388 (Bottlenosed dolphin)

Gene Details

calcium channel, voltage-dependent, T type, alpha 1H subunit

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000364, Bottlenosed dolphin)

Protein Percentage 85.43%
cDNA percentage 86.01%
Ka/Ks Ratio 0.17326 (Ka = 0.0221, Ks = 0.1277)

CACNA1HENSBTAG00000026461 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000012991, Cow)

Protein Percentage 91.12%
cDNA percentage 90.13%
Ka/Ks Ratio 0.07989 (Ka = 0.0453, Ks = 0.5665)

Additional orthologs identified in other species via the OPTIC pipeline.

CACNA1H (Human)   Cacna1h (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 6888 bp    Location:2002678..2029393   Strand:+
Raw sequence 
>bmy_01904
ATGCTGGTCATCATGCTCAACTGCGTGACCCTGGGCATGTTCCGGCCCTGCGAGGACGTCGAGTGCCGCTCGGAGCGCTGCAGCATCCTGGAGGCGTTTGACGATTTCATCTTCGCCTTCTTCGCGGTGGAGATGGTCATCAAGATGATCGCCCTCGGGCTGTTCGGGCAGAAGTGCTACCTGGGCGACACGTGGAACAGGCTGGACTTCTTCATCGTCATGGCGGGCATGATGGAGTACTCTCTGGACGGACACAACGTGAGCCTCTCGGCCATCCGGACAGTGCGCGTGCTGCGGCCCCTTCGTGCCATCAACCGTGTGCCCAGCATGAGGATCCTGGTCACGCTGCTGCTGGACACGCTGCCCATGCTCGGGAACGTCCTCCTGCTCTGCTTCTTTGTCTTCTTCATCTTCGGCATCGTGGGTGTCCAGCTTTGGGCTGGCCTGCTGCGCAACCGCTGCTTCCTGGACAGCACCTTTGCCAGGAACAGCAACCTCAGCTTCCTGCGGCCATACTACCAGCCGGAGGAGGGTGAGGAAAACCCCTTCATCTGCTCCTCTCGCCGGGACAACGGCATGCAGAAGTGCTCGCACATCCCCAGCCGCCGCGAGCTGCGCGTGGAGTGCACGCTGGGCTGGGAGGCCTACGGGCAGCCGCAGGCCGAGGGCGCAGGTGGCACAGGCCACCACACCTGCATCAACTGGAACCAGTACTACAATGTGTGCCGCTCGGGCGACTCCAACCCACACAACGGGGCCATCAGCTTCGACAACATCGGCTATGCCTGGATCGCCATCTTCCAGGTGATCACGCTGGAGGGCTGGGTGGACATCATGTACTACGTCATGGATGCCCACTCCTTCTATAACTTCATCTACTTCATCCTGCTCATCATTGTGGGTTCCTTCTTCATGATCAACCTGTGCCTAGTGGTGATCGCCACGCAGTTCTCGGAGACGAAGCAGCGGGAGAACCAGCTGATGCGGGAGCAGCGGGCCCGCTACCTGTCCAATGACAGCACGCTGGCCAGCTTCTCAGAGCCTGGCAGCTGCTATGAGGAGCTCCTCCGGTACGTGGGCCATGTGTGCCGCAAGCTGAAGCGCCGTGGCCTCCGCCTCTATGCCCTCTGGCAGAGCCGCTGGCGCAAGAAGGTGGACCCCAGCGGCGTGCCGCACGGCCAGGGCGCTGGGTGGCGGCCACGGCGGGCGGGAGGGCGCGCCACCTCCATCCATCACCTCGTGTACCACCACCACCACCACCACCACCACCACTACCACTTCAGCCATGGCAGCCCACGCCGGCCAGGCCCCGAGCCAGGCGGCGGTGACACCAGGCTGGTGCGGGCCGGAGCACCTCCCTCGCCCGGGCGTGGGCCCCCCGACGCTGAGTCAGTGCACAGCGTGTACCATGCAGACTGCCACGTGGAGGGGCCACAGGAGAGGGCCCGGGTGGCACATGCTGTGGCCACTGCCGCCGCCGGCCTCAAGCTGGCCACTGGGCTGGGCGCCATGAACTACCCCACCATCCTGCCCTCGGCCGCAGGCAGTGGCAAAGGTGGCCCCGGGCCCAAGGGGAAGCGTCCTGGTGGACCCCTGGGAGCCGGGGGGCACAGCCCCCTGAGCCTGAGCAGCCCCGACCCCTGCGAGAAGATCCAGCATCTGGTCGGGGAGCACGGACTGGGCCAGGCCCCCAGCCGTCTGTCAGGCCTGAGCGTGCCCTGCCCCCTGCCCAGCCCCCAGGCGGGCACGCTGACCTGTGAGCTGAGTAGCTGCCCGTACTGCACCAGCGCCCTGGAGGACCCCGAGCTGGAGTTCAGCGACTCAGACAGCGGAGACTCGGACAGCAACGGGGTCTACGAATTCACACGGGATGTGCGGCACGGGGACCGCCGTGACCCCGTGCAGCCACCCCCAGCGGCGGACACGCCAGGCTCAGGAGGAACGCGGCGGAGGGCACAGCGGCGGGCGGTGGCAGACGAGCAGAGAGGGCTGGGCCACGTCTGGGCCTCCTTTAGCGGCAAGCTGCGCCGCATCGTGGACAGCAAGTACTTCAACCGCGGCATCATGGTAGCCATCCTCACCAACACGCTGAGCATGGGCATCGAGTACCATGAGCAGCCTGACSAGCTGACCAACGCCCTGGAGATCAGCAACATCGTGTTCACGAGCATGTTTGCCCTGGAGATGCTGCTGAAGCTGCTGGCCTGCGGTCCGCTGGGCTACATCCGGAATCCCTACAACATCTTCGATGGCATCATCGTGGTCATCAGCGTGTGGGAGATCATCGGGCAGGCAGACGGCGGGCTGTCGGTGCTGCGGACCTTCCGGCTGCTGCGGGTGCTCAAGCTGGTGCGCTTCATGCCCGCGCTGCGGCGCCAGCTGGTGGTGCTCATGAAGACCATGGACAACGTGGCCACCTTCTGCATGCTGCTCATGCTCTTCATCTTCATCTTCAGCATCCTCGGAATGCACCTGTTTGGCTGCAAATTCAGCCTGAAAACAGACACTGGAGACACGGTCCCYGACAGGAAGAACTTTGACTCCCTGCTGTGGGCCATCGTCACCGTGTTCCAGATCCTCACCCAGGAGGACTGGAACGTTGTCCTCTACAACGGCATGGCCTCCACCTCCTCCTGGGCTGCCCTCTACTTCGTGGCCCTCATGACCTTTGGCAACTACGTGCTCTTCAACCTGCTGGTGGCCATCCTTGTGGAGGGCTTCCAGGCGGAGGGCGATGCCACCAGGTCCGACACAGATGAAGACAAGACCTCCACCCACTTGGAGGAGGACTTGGACAAGTTCAGAGACCTCAGGGCCACAGGTGCACATGCGGAGATGAAGATGTACTCGCTGGCGGTGACCCCCAACGGGCACCTGGAGGGCCAGGGCAGCCTGCCCCCTCCCCTCATCATGCGCACGGCAGCCACACCCATGCCCACCCCCAAGAGCTCCCCACACCTGGACGCGGCCCCTGGCCTCCTGGACTCACGACGTGGCAGCAGCAGCTCCGTGGACCCCCAGCTGGGGGACCAGAAGTCTCTGTCCAGCCTCCGCAGCTCGCCCTGCACCCACTGGGGCCCCAACAGCGCCTGGAGCAGCCGGCGCTCCAGCTGGAACAGCCTGGGCCGCGCACCTAGCCTCAAGCGCCGGAGCCAGTGCGGGGAGCGTGAGTCGCTGCTGTCCGGCGAGGGCAAGGGCAGCGGCAGCACGGACGAGGAGGCCGAGGACAGCAGGCCTGGTGCGGGAGCCTCGCCAGGCACACATGCCACACCGCTGCGGCGCGCCGAGTCCCTGGACCACCGCAGCACACTCGACCTGCGGCCCCCGCGGCCGGCCACCCTGCTGCCCACCAAGCTCCACGACTGCAACGGGCTGGCCCTGCCCAGCGAGTTCTTCCTGCGCATCGACAGCCACAAGGAGGACACGGCCGAGTTTGACGATGATGTGGAGGATAGCTGCTGCTCCCGGCTGCAGAAAGTGCTGGAGCCCTACAAGCCCGAGTGCTGTCGAAGCCGCGAGCCCTGGGCCCTGTACCTCTTCTCCCCACAGAACAGGTTCCGCATCTCCTGCCAGAAGATCATCGCTCACAAGATGTTCGATCACGTCGTCCTGGTCTTCATCTTCCTCAACTGCATCACGATCGCCCTGGAGAGGCCCGACATTGACCCTGGCAGCACCGTGAGGCGCCCTCCTTGCCTGGGAGGGGTGGGGTCCCGCCGTTGCGGCCGGCCCCTCCCATCGTCCTGTCCCCTGCAGGAGCGCGTCTTTCTCAGCATCTCCAACTACATCTTCACGGCGATCTTCGTGGCCGAGATGATGGTGAAGGTGGTGGCCCTGGGCCTGGTCTCTGGTGAGCATGCCTACCTGCAGAGCAGCTGGAACATACTGGATGGGCTGCTGGTCCTGGTGTCCCTGGTTGACATCATCGTGGCCATGGCGTCGGCCGGCGGTGCCAAGATCCTGGGCATCCTGCGTGTGCTGCGCCTGTTGCGGACACTGCGGCCCCTGAGGGTCATCAGCCGTGCCCCAGGCCTCAAGCTGGTGGTGGAGACTCTGATATCGTCACTCAGGCCCATCGGAAACATTGTCCTCATCTGCTGTGCCTTCTTCATCATTTTCGGCATCCTAGGGGTGCAGCAGGAGGCCACGTCCAGAAGTAACCACCTTGCTCTGGCCTCGCAGGCGCTGATGTCCCTGTTCGTGCTCTCGTCCAAGGACGGCTGGGTGAACATCATGTACGACGGGCTGGACGCCGTGGGCATAGACCAGCAGCCGGTGCCCAACCACAACCCCTGGATGCTGCTCTACTTCATCTCCTTCCTGCTCATCGTCAGCTTCTTTGTGCTCAACATGTTCGTGGGCGTCGTGGTGGAGAACTTCCACAAGTGCCGCCAGCACCAGGAGGCCGAGGAGGCGCGGCGGCGGGAAGAGAAGCGGCAGCGGCGCCTGGAGAGGAAACGCAGGAAGGCCCAGCGCCGGCCCTACTATGCGGACTACTCACCCACGCGTCGCTCCATCCACTCTCTGTGCACCAGCCACTATCTGGACCTCTTCATCACCTTCATCATCGGCGTCAACGTCATCACCATGTCCATGGAGCACTACAACCAGCCCAAGTCTCTGGACGAGGCCCTCAAGTACTGCAATTATGTGTTCACCATCGTCTTCGTCTTTGAGGCCGTGCTGAAGCTGGTGGCGTTTGGGTTCCGGAGGTTTTTCAAGGACAGGTGGAACCAGCTGGACCTGGCCATCGTCCTGCTGTCCATCATGGGCATCACACTGGAGGAGATAGAGATGAACGCGGCGCTGCCCATCAACCCCACCATCATCCGCATCATGCGTGTGCTCCGCATCGCCCGCGTGCTGAAGCTGCTCAAGATGGCCACGGGTATGCGGGCCCTGCTGGACACAGTGGTTCAGGCGCTGCCCCAGGTAGGGAACCTCGGCCTGCTTTTCATGCTCCTGTTTTTTATCTATGCTGCCCTGGGAGTGGAGCTGTTTGGGAGGCTCGGTGAGTGCAGCCGCGCCGTGGCCCACACTCCAGACACGGGATCCCTCCCGGCAGAGTGCAGTGAGGACAACCCCTGCGAGGGCCTGAGCAGACACGCCACCTTCTCCAACTTTGGCATGGCCTTCCTCACACTGTTCCGCGTGTCCACGGGGGACAACTGGAACGGGATCATGAAGGACACGCTGCGGGAGTGCGCCCGTGAGGACAAGCACTGCCTCAGCTACCTGCCGGCCATCTCGCCCATCTACTTCGTCACCTTCGTGCTGGTGGCCCAGTTCGTGCTGGTCAACGTGGTGGTGGCCGTGCTCATGAAGCACCTGGAGGAGAGCAACAAGGAGGCCCGCGAGGATGCCGAGCTGGACGCGGAGGTCGAGCTGGAGATGGCACAGGGGCCCCCCGCCCGCCCCAGGCCCACGGCCTCGCCAAGCCCGGGTGCCTCGCCGGACGCCCCCAACCTGCTGGTCGTGCGCAAGGTGTCTGTGTCCAGGATGCTCTCGCTGCCCAACGACAGCTACATGTTCCGGCCCGTGGCGCCCGCTGCGGCCGCTCATCCCCACCCTCTGCAGGAGGTGGAGATGGAGACCTACGCGGGCGCCTCGGGCACCTCGGATACAGCCCCACTCGGAGACAGCCAGGACCTGGGCGGGCGGGGCCGGCCAGGGCCGGCAGAGGCAGGGGTGGGGCCAGCAGCGGATGCACATTTCAGGCACCTTCTTGCCCCAGGCCCGGTCACCGCCCACTTGCCGCCCGTGGAGTCCTGCCCATCCCTCCAGGTCCCGTCGGCCATGTCCTCCCAAGCCAGGGGCGGCGACACCCAACGTGCCCTGACCCCTCTGGGTGCAGCCTGCTCCCCTAGTCTCAGCCGGCTGCTCTGCACACAGGAGGTAGTCTGCACAGAGTCCCTAGAAGGGCAGGTCGATGGTCCCAGGGACAGCAGCCCGGGCTGGGGAGAGCCTGGTGGGAAGACCCCTGTGAGGCAGGCGCCCCTGGGGCCCTCCTTGCGGTCCCCGCCCCGTTCCCCGCGGCCCACCAGCATCCGCATCCGCAAGCACACTTTTGGACAGAACTACATCTCCAGCCGGCCACCGGCCCTGGGCGCAGAGGAGGCTGAGGCCCCAGACCCGGCTGACGAGGAGGTCAGCCACATCACCAGCTCTGCCCACAGCCCCTCGGCCTCACCTGCTGCCCGCGGGGTGGTGGGCGGTGAGCCAGACCTGCACAGGCTCTACAGTGTCAATGCCCAGGGCTTCCTGGACCAGCCGGGCCGGGCGGACGAGCAGAGGCGGCCCTCTGTGGAGCAGGGCTGTGGGGACAGCCGCCCAGAGGCTGGGGAGGCGAAGACCCGGGCCCTGGAGGCCGAGCTGGCCCTGGGAGCACGCAGGAAGAAAAAGATGAGCCCCCCCTGCATCTCCATAGAGCCCCCTGCGGAGGACGAGGGTGCGGCCCGGGCCCCTGCAGCGGAGGGCGGTAGCACCACCCTGCGGCGGAGAACCCCATCCTGCGAGGCTGTGCCCCACAGGGACCCCCTGGAGCCCACAGACAGTGCAGGGTTGGACACTGCTGCCAAGGGGGAACGGCGGGTCCAGGTCCCCTGCCGCACGGAACACCTGACCATCCCGAACTTTGCCTTTGAGCCGCTGGACGTGGGGGGCCCCAGGGGGGACCTGTTCTTGGATGGTGGCCATGGTGTCGCCCCAGAGCCCAGACCTTCCTCCTCAGGCATCACGGCACCTCCCGAACCCCAGAAGACGGAGCTTCCGGTGGCCTCGGGAGAACCCCCAGAGGAGGGGCGGGGGCTGCACCTCACAGTCCCTGAGAGCCCACCGAAGAAAGGGTCCACTCCAGTCCTGGGTGACAGTGTGGACAAGCCCGTGTAG

Related Sequences

bmy_01904T0 SequenceType object (3)

Length: 2296 aa      View alignments
>bmy_01904T0
MLVIMLNCVTLGMFRPCEDVECRSERCSILEAFDDFIFAFFAVEMVIKMIALGLFGQKCYLGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDSTFARNSNLSFLRPYYQPEEGEENPFICSSRRDNGMQKCSHIPSRRELRVECTLGWEAYGQPQAEGAGGTGHHTCINWNQYYNVCRSGDSNPHNGAISFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENQLMREQRARYLSNDSTLASFSEPGSCYEELLRYVGHVCRKLKRRGLRLYALWQSRWRKKVDPSGVPHGQGAGWRPRRAGGRATSIHHLVYHHHHHHHHHYHFSHGSPRRPGPEPGGGDTRLVRAGAPPSPGRGPPDAESVHSVYHADCHVEGPQERARVAHAVATAAAGLKLATGLGAMNYPTILPSAAGSGKGGPGPKGKRPGGPLGAGGHSPLSLSSPDPCEKIQHLVGEHGLGQAPSRLSGLSVPCPLPSPQAGTLTCELSSCPYCTSALEDPELEFSDSDSGDSDSNGVYEFTRDVRHGDRRDPVQPPPAADTPGSGGTRRRAQRRAVADEQRGLGHVWASFSGKLRRIVDSKYFNRGIMVAILTNTLSMGIEYHEQPDZLTNALEISNIVFTSMFALEMLLKLLACGPLGYIRNPYNIFDGIIVVISVWEIIGQADGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDATRSDTDEDKTSTHLEEDLDKFRDLRATGAHAEMKMYSLAVTPNGHLEGQGSLPPPLIMRTAATPMPTPKSSPHLDAAPGLLDSRRGSSSSVDPQLGDQKSLSSLRSSPCTHWGPNSAWSSRRSSWNSLGRAPSLKRRSQCGERESLLSGEGKGSGSTDEEAEDSRPGAGASPGTHATPLRRAESLDHRSTLDLRPPRPATLLPTKLHDCNGLALPSEFFLRIDSHKEDTAEFDDDVEDSCCSRLQKVLEPYKPECCRSREPWALYLFSPQNRFRISCQKIIAHKMFDHVVLVFIFLNCITIALERPDIDPGSTVRRPPCLGGVGSRRCGRPLPSSCPLQERVFLSISNYIFTAIFVAEMMVKVVALGLVSGEHAYLQSSWNILDGLLVLVSLVDIIVAMASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQQEATSRSNHLALASQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPVPNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRQRRLERKRRKAQRRPYYADYSPTRRSIHSLCTSHYLDLFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAVLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLGECSRAVAHTPDTGSLPAECSEDNPCEGLSRHATFSNFGMAFLTLFRVSTGDNWNGIMKDTLRECAREDKHCLSYLPAISPIYFVTFVLVAQFVLVNVVVAVLMKHLEESNKEAREDAELDAEVELEMAQGPPARPRPTASPSPGASPDAPNLLVVRKVSVSRMLSLPNDSYMFRPVAPAAAAHPHPLQEVEMETYAGASGTSDTAPLGDSQDLGGRGRPGPAEAGVGPAADAHFRHLLAPGPVTAHLPPVESCPSLQVPSAMSSQARGGDTQRALTPLGAACSPSLSRLLCTQEVVCTESLEGQVDGPRDSSPGWGEPGGKTPVRQAPLGPSLRSPPRSPRPTSIRIRKHTFGQNYISSRPPALGAEEAEAPDPADEEVSHITSSAHSPSASPAARGVVGGEPDLHRLYSVNAQGFLDQPGRADEQRRPSVEQGCGDSRPEAGEAKTRALEAELALGARRKKKMSPPCISIEPPAEDEGAARAPAAEGGSTTLRRRTPSCEAVPHRDPLEPTDSAGLDTAAKGERRVQVPCRTEHLTIPNFAFEPLDVGGPRGDLFLDGGHGVAPEPRPSSSGITAPPEPQKTELPVASGEPPEEGRGLHLTVPESPPKKGSTPVLGDSVDKPV*