Part of scaffold_47 (Scaffold)

For more information consult the page for scaffold_47 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TSR3 ENSTTRG00000011979 (Bottlenosed dolphin)

Gene Details

TSR3, 20S rRNA accumulation, homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011359, Bottlenosed dolphin)

Protein Percentage 96.09%
cDNA percentage 97.07%
Ka/Ks Ratio 0.23049 (Ka = 0.0173, Ks = 0.0752)

C25H16ORF42 ENSBTAG00000014101 (Cow)

Gene Details

probable ribosome biogenesis protein C16orf42 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018749, Cow)

Protein Percentage 91.88%
cDNA percentage 90.26%
Ka/Ks Ratio 0.12332 (Ka = 0.0452, Ks = 0.3669)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 927 bp    Location:2126380..2122840   Strand:-
>bmy_01911
ATGGGCCGCCGCAGGGCAGCGCGTGGGCCGGGGGCCGAAGGTGGCCGCATTCGGCGCCCCGCGGGCCGCTCTCTGGAGGCTTTCGCCGAGGAGGTGGGCGCCGCGCTGCGCGCGTCCGTGGAGCCAGAGGCGGCCGAGGACGAGGGCGTCCCGGGCCCTGCGCAGCTGCCCTGCGCTCTGGCCATGTGGGAGCTGGGCCACTGCGACCCCCGGCGCTGCACCGGCCGCAAGCTGGCGCGCCTGGGACTGGTACGCTGCCTACGTCTGGGCCACAGGTTCGGCGGCCTCGTGCTCAGCCCCGTGGGCTCCCAGTACGTGTCCCCCGCAGACAGACAGTTGGTGGCACGGTCCGGGGTCGCCGTCATCGACTGCTCCTGGGCCAGACTGGATGAGACTCCGTTTGGGAAGATGCGAGGGAGCCACTTGCGGATCCTGCCCCACCTGGTGGCTGCCAACCCTGTGAACTATGGCCGGCCTTGCAGGCTCTCCTGCGTGGAGGCCTTCGCTGCTACCTTCTGCATCCTGGGTTTTTCAGACCTTGCTGTCATTTTGCTACGGAAGTTCAAGTGGGGCAAGGGCTTCCTAGACCTGAACCGCCAGCTCCTGGACAAGTATGCAGCCTGCAGTGGCCCAGAGGAGGTGCTGCAGGCAGAGCAGGAGTTCCTGGCCCACACCAAGGAGCCTGAGAAAGAGGAGGAAATCGATCCCTTTGATGTGGATTCAGGGCGAGAGTTTGCAAACCCCAACAGGCCCGTGTCTGGCCCCCGGCTGCCCAGAGACAGGGCTGACAGTGACACCGAGGAGGAGTCTGAGGAACTTGGGCCTGACCCCGAGGACGGGGGAGGCAGCAGCAGCAGCCCTGAAGAGAGGGAGGCCAGGGTCCCCACAGAGATTTGGAAAGGAATCAAGAAACGGCAGAGAGACTGA

Related Sequences

bmy_01911T0 Protein

Length: 309 aa      View alignments
>bmy_01911T0
MGRRRAARGPGAEGGRIRRPAGRSLEAFAEEVGAALRASVEPEAAEDEGVPGPAQLPCALAMWELGHCDPRRCTGRKLARLGLVRCLRLGHRFGGLVLSPVGSQYVSPADRQLVARSGVAVIDCSWARLDETPFGKMRGSHLRILPHLVAANPVNYGRPCRLSCVEAFAATFCILGFSDLAVILLRKFKWGKGFLDLNRQLLDKYAACSGPEEVLQAEQEFLAHTKEPEKEEEIDPFDVDSGREFANPNRPVSGPRLPRDRADSDTEEESEELGPDPEDGGGSSSSPEEREARVPTEIWKGIKKRQRD*