Part of scaffold_48 (Scaffold)

For more information consult the page for scaffold_48 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NR0B1 ENSTTRG00000013272 (Bottlenosed dolphin)

Gene Details

nuclear receptor subfamily 0, group B, member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012591, Bottlenosed dolphin)

Protein Percentage 96.77%
cDNA percentage 97.84%
Ka/Ks Ratio 0.22497 (Ka = 0.0136, Ks = 0.0602)

NR0B1 ENSBTAG00000015532 (Cow)

Gene Details

nuclear receptor subfamily 0 group B member 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020641, Cow)

Protein Percentage 82.37%
cDNA percentage 88.17%
Ka/Ks Ratio 0.22926 (Ka = 0.0866, Ks = 0.3775)

NR0B1  (Minke Whale)

Gene Details

nuclear receptor subfamily 0, group B, member 1

External Links

Gene match (Identifier: BACU005847, Minke Whale)

Protein Percentage 97.35%
cDNA percentage 98.45%
Ka/Ks Ratio 0.27615 (Ka = 0.0101, Ks = 0.0367)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1398 bp    Location:47777..42943   Strand:-
>bmy_01935
ATGGCGGGCGAGGACCAGCAGTGGCAGGGCAGCATCCTCTACAACATGCTCATGAGCGCGAAGCAAACGCACGCGACTCCGGAGGCGCCCGAGGCACGGCCGGGGGGCGCGTGCTGGGGCTGCTCCTGCGGCTCGGAGCCCCCGGTGGGCAGAGAGGGGCTGCCAGGTGAAAGGCCAGTGGCGCTCCTGTACCGCTGCTGCTTTTGCGGCGAAGACCACCCGCGGCAGGGCAGCATCCTCTACAACATGCTCACGAGCGCGAAGCAAACGCAGAAGACTCCGGAGGCGCCCGAGGCCCGGCGGGGGGGCGCGTGCTGGGGCTGCTCCTGTGGCTCGGAGCCCCCAGTGGGCAGAGAGGGACTGCCGGGTGGGCGGGCCACGGTGCTCCTGTACCGCTGCTGCTTTTGCGGTGAAGACCACCCGCGGCAGGGCAGCATCCTGTACAGCTTGCTCACCAGCGCAAAGCAAACGCACGTGGCTCCGGAAGCTCCTGAGGCGCGGCCGGGGGGCGCGTGGTGGGACCGCTCCTACTGCGCGCAGAGGCTGGCGGGCAGAGAGGAGCTGCCGCGTGGGCGGGCCTTGGCGCTCCCGTGCCGCTGCTGCTTTTGCGGTGAAGACCACCCGCGGCAGGGCGGCATCCTCTGCAACGTGCCCATGAACGCAAAGCAAACGCACGTGGCTCCAGAGGCACAGCTGGGGGCCCCCTGGTGGGACCCCTCGTGCGGCGCGCAGCGGCGGGTGGCCCTCAAGAGCCCACAAGTGGTCTGCGAGGCAGCCTCGGCGGCCCTGTTGAAGACGCTGCGCTTCGTCAAGTACCTGCCCTGCTTCCAGGTGCTGCCCCTGGACCAGCAGCTGGTGCTGGTGCGCAGCTGCTGGGCGCCGCTACTCATGCTGGAGCTGGCCCAGGACCGCTTGAACTTTGAGACGGTGGAGACCTCCGAACCCAGCCTGCTGCAGAGGATCCTCACCACCAGGCGGCGGGAGACCGAGGGCGACGAGCCGCAGCCACATTTGGTACTGCCGCCGGAGGCTGAGCATTTGCCATTGGCCGCCGAGGTCCAAGCCATCAAGGGCTTCCTCGCCAAGTGCTGGAGCCTGGACATCAGTACCAAGGAGTACGCCTACCTCAAGGGGACCGTGCTCTTTAACCCGGACCTACCAGGTCTGCAGTGCGTGAAATACATCCAGGGACTTCAGTGGGGAACCCAGCGGATACTCCGTGAACACGTCAGGCTGACACACAGGGGGCACCAGGCCAGATTTGCCGAACTGAACAGCACCCTCTTCCTGCTGAGATTCATCAATGCCAATGTCCTGGCTGAACTGTTCTTCAGGCCCATCATCGGCCCAGTCACCATGGATGATATGATGCTAGAGATGCTCTGTGCGAAGTTATGA

Related Sequences

bmy_01935T0 Protein

Length: 466 aa      View alignments
>bmy_01935T0
MAGEDQQWQGSILYNMLMSAKQTHATPEAPEARPGGACWGCSCGSEPPVGREGLPGERPVALLYRCCFCGEDHPRQGSILYNMLTSAKQTQKTPEAPEARRGGACWGCSCGSEPPVGREGLPGGRATVLLYRCCFCGEDHPRQGSILYSLLTSAKQTHVAPEAPEARPGGAWWDRSYCAQRLAGREELPRGRALALPCRCCFCGEDHPRQGGILCNVPMNAKQTHVAPEAQLGAPWWDPSCGAQRRVALKSPQVVCEAASAALLKTLRFVKYLPCFQVLPLDQQLVLVRSCWAPLLMLELAQDRLNFETVETSEPSLLQRILTTRRRETEGDEPQPHLVLPPEAEHLPLAAEVQAIKGFLAKCWSLDISTKEYAYLKGTVLFNPDLPGLQCVKYIQGLQWGTQRILREHVRLTHRGHQARFAELNSTLFLLRFINANVLAELFFRPIIGPVTMDDMMLEMLCAKL*