Part of scaffold_50 (Scaffold)

For more information consult the page for scaffold_50 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PLBD1 ENSTTRG00000012435 (Bottlenosed dolphin)

Gene Details

phospholipase B domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011799, Bottlenosed dolphin)

Protein Percentage 85.2%
cDNA percentage 86.88%
Ka/Ks Ratio 0.53335 (Ka = 0.1242, Ks = 0.2328)

PLBD1 ENSBTAG00000015562 (Cow)

Gene Details

Phospholipase B-like 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020677, Cow)

Protein Percentage 83.03%
cDNA percentage 84.84%
Ka/Ks Ratio 0.45107 (Ka = 0.138, Ks = 0.3058)

PLBD1  (Minke Whale)

Gene Details

phospholipase B domain containing 1

External Links

Gene match (Identifier: BACU016977, Minke Whale)

Protein Percentage 85.56%
cDNA percentage 87.61%
Ka/Ks Ratio 0.58706 (Ka = 0.1203, Ks = 0.205)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 864 bp    Location:815720..823974   Strand:+
>bmy_01966
ATGCTGATTTGTATATTCGTGTTTCCTGTAGGGTTTTTGGAGTCTCTGGACGACTTTTACCTTCTCAGCAGTGGTTTGGTATTGCTGCAGACCACAAACAGCGTGTATAATAAAACCCTACTGCAGCACGTGGTACCCCAGTCTCTCCTGGCCTGGCAAAGAGTCCGGGTGGCCAATATGATGGCAAATGGAGGCAAGCAGTGGGCAGAGGTCTTTTCAAAATACAACTCTGGCACGTATAACAATCAGTACATGGTCCTGGACCTGAAGAAGGTAAATCTGAACTACAGCCTTGATAAAGGCACTCTGTACATTGTGGAGCAAATTCCTACGTATGTAGAATATTCTGAGCAAACTGATGTTCTGCGGACAGGATACTGGCCCTCCTACAACATTCCTTTCCATGAAAAAATCTACAACTGGAGTGGCTATCCAATGTTGGTTAAGAAGCTGGGTTTGGACTACTCTTATGATCTGGCTTCACGAGCCAAAATCTTCCGGCGTGACCAAGGGAAAGTGACTGATATGGAATCCATGAAATATATCATGCGATACAACAAAGAAAGAACCCATGTAGGGTACTTTTTTTACCCTACCGTCCCAAACACAGATTTCCTTCCAAGGAGGAAAGCAGCTACTAAAACAACAATTATTCGTAAACACTTTATTTTTGATGAACAGTATCGAGTCAGATTTGTGGCAGACATCTACCTGGCATCCGAGTACACGGCCTATGCCATTAGTGGGCCCACAGTACAAGGCGGCCTCCCTGTTTTTCACTGGAGCCGTTTCAACAAAACTCTCCATGAGGGCATGCCAGAGGCCTACAACTTTGATTTTATTACCATGAAACCAATTTTGTAA

Related Sequences

bmy_01966T0 Protein

Length: 288 aa      View alignments
>bmy_01966T0
MLICIFVFPVGFLESLDDFYLLSSGLVLLQTTNSVYNKTLLQHVVPQSLLAWQRVRVANMMANGGKQWAEVFSKYNSGTYNNQYMVLDLKKVNLNYSLDKGTLYIVEQIPTYVEYSEQTDVLRTGYWPSYNIPFHEKIYNWSGYPMLVKKLGLDYSYDLASRAKIFRRDQGKVTDMESMKYIMRYNKERTHVGYFFYPTVPNTDFLPRRKAATKTTIIRKHFIFDEQYRVRFVADIYLASEYTAYAISGPTVQGGLPVFHWSRFNKTLHEGMPEAYNFDFITMKPIL*