Part of scaffold_50 (Scaffold)

For more information consult the page for scaffold_50 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GSG1 ENSTTRG00000012825 (Bottlenosed dolphin)

Gene Details

germ cell associated 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012168, Bottlenosed dolphin)

Protein Percentage 68.57%
cDNA percentage 74.83%
Ka/Ks Ratio 0.59525 (Ka = 0.2739, Ks = 0.4601)

GSG1 ENSBTAG00000004721 (Cow)

Gene Details

Germ cell-specific gene 1 protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006198, Cow)

Protein Percentage 76.33%
cDNA percentage 84.35%
Ka/Ks Ratio 0.59474 (Ka = 0.1548, Ks = 0.2603)

GSG1  (Minke Whale)

Gene Details

germ cell associated 1

External Links

Gene match (Identifier: BACU016983, Minke Whale)

Protein Percentage 82.79%
cDNA percentage 88.93%
Ka/Ks Ratio 0.66862 (Ka = 0.109, Ks = 0.163)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 813 bp    Location:2068946..2072737   Strand:+
>bmy_01973
ATGGAGCTCCCGAAGGCCATTTCTGATCAATGGACATGCCTATCTGCCTTCCTCAACATGCTATCACTCAGCCTCTCCACAGCATCCCTGCTCAGCAACTACTGGTTTGTGGGCATACAGAAGGTGCCCAAGCCCCTGTGCGGGAAAGGTCTGCCAGCCAAGTGCTTTGATGTGCCGGTGCCCTTGGATGGGAGCAGTGCCAATGCATCATCCCAGGAGGTGGTGCAATACAGCTGGGAGACTGGGGATGACCGCTTCACCTTCCGTGCCTTCCGGAGTGGCATGTGGCTCTCCTGTGAGGAAATCGTGGAAGACCCAGCACTGCTCCAACTCCAGTCCCGGAAACAGTTTAGAGCCCTGCAGGCCAGTGGTACAGCAGGAGCAAAAGAGGCTGGGGAGAGGTGCCGAAGTTTCCTTGAACTCACACCACCAACCGAGAGAGGTGAGAAAGGACTACTGGAATTTGCCACGTTGCAAGGCCCATGTCACCCCACTCTCCGATTTGGAGGGAAGCGGTTGATGGAGAAGGCTTTCGTCCCCCACCTTCCCTTGGGGCTTGGGGCAAAGATCCTATGCTTATCACTGGGAGTCCAATTCGCCTACATCGGACTTGAACTCTTCAGCTTCCTCCTCGTACTGATGGACTTGCTATTCACGGGGAACCCCAGCTGTGGCCTCAAGCTGAGCACCTTCACCGCCATCTTCTCTGCCTTGTCAGGTATTGGGAGACACAGAAATGAAGAATCAGCCTTGCAATCTGGATTGGAGTCCATTCCTGTGAATGGCTCACTCTTCTCCTGTGACAAAGAGTGA

Related Sequences

bmy_01973T0 Protein

Length: 271 aa      View alignments
>bmy_01973T0
MELPKAISDQWTCLSAFLNMLSLSLSTASLLSNYWFVGIQKVPKPLCGKGLPAKCFDVPVPLDGSSANASSQEVVQYSWETGDDRFTFRAFRSGMWLSCEEIVEDPALLQLQSRKQFRALQASGTAGAKEAGERCRSFLELTPPTERGEKGLLEFATLQGPCHPTLRFGGKRLMEKAFVPHLPLGLGAKILCLSLGVQFAYIGLELFSFLLVLMDLLFTGNPSCGLKLSTFTAIFSALSGIGRHRNEESALQSGLESIPVNGSLFSCDKE*