Sequence detailsbmy_01990 (Coding sequence)

Part of scaffold_49 (SequenceType object (1))

For more information consult the page for scaffold_49 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IFI6ENSTTRG00000008486 (Bottlenosed dolphin)

Gene Details

interferon, alpha-inducible protein 6

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008032, Bottlenosed dolphin)

Protein Percentage 92.8%
cDNA percentage 96.27%
Ka/Ks Ratio 0.65405 (Ka = 0.0357, Ks = 0.0546)

IFI6ENSBTAG00000007554 (Cow)

Gene Details

Interferon alpha-inducible protein 6

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000009939, Cow)

Protein Percentage 82.44%
cDNA percentage 87.02%
Ka/Ks Ratio 0.30986 (Ka = 0.1063, Ks = 0.343)

Additional orthologs identified in other species via the OPTIC pipeline.

IFI6 (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 396 bp    Location:124163..127528   Strand:+
Raw sequence 
>bmy_01990
ATGCGGCAGAAGGCGGTATCGCTCGTCTTGTGCTACTTGCTACTCTACACCTGCGGCTGCGAGGAGACAGACGAAAGACGCTCCGGGGACGGTGACTCTGGGTTCTGGGGCACGCTGACCTACATGGCCGTCGGAGGAGGGCTCATGGCCATGGCGCTGCCCGCGCTGGGCTTCGCGAGCACAGGCATCGCCGCCAACTCGGTGGCTGCCTCGCTGATGAGCTGGTCGGCCGTGGCGAACGGGGGCGGAGTGCCCGCCGGGGGGCTGGTGGCCACGCTGCAGAGCCTGGGGGCTAGCGGTGGCAGTGCCCTCATGGCCAAGATTGGGGCCCTTCTGGGCTATACTATCCACAAGCAAATCGAAAGCAGAGGGAAGGAGAGAGCGGATGAAGAGTAG

Related Sequences

bmy_01990T0 SequenceType object (3)

Length: 132 aa      View alignments
>bmy_01990T0
MRQKAVSLVLCYLLLYTCGCEETDERRSGDGDSGFWGTLTYMAVGGGLMAMALPALGFASTGIAANSVAASLMSWSAVANGGGVPAGGLVATLQSLGASGGSALMAKIGALLGYTIHKQIESRGKERADEE*