Part of scaffold_49 (Scaffold)

For more information consult the page for scaffold_49 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SYTL1 ENSTTRG00000015458 (Bottlenosed dolphin)

Gene Details

synaptotagmin-like 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014653, Bottlenosed dolphin)

Protein Percentage 90.19%
cDNA percentage 91.92%
Ka/Ks Ratio 0.3719 (Ka = 0.0244, Ks = 0.0656)

SYTL1 ENSBTAG00000010253 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013544, Cow)

Protein Percentage 86.76%
cDNA percentage 90.53%
Ka/Ks Ratio 0.25889 (Ka = 0.0672, Ks = 0.2597)

SYTL1  (Minke Whale)

Gene Details

synaptotagmin-like 1

External Links

Gene match (Identifier: BACU003242, Minke Whale)

Protein Percentage 97.89%
cDNA percentage 98.85%
Ka/Ks Ratio 0.43284 (Ka = 0.0091, Ks = 0.0211)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1566 bp    Location:391878..383482   Strand:-
>bmy_01999
ATGCCCCAGAGGGGCCACCCATCTCAAAAGGGGTTCTGGTCCCTGCCTGGCCTCCTCATGGCACATGAGCCACAGCCTGAGGCTGATGGGCTATTGGATCTCAGTTTCCTGACAGAGGAGGAGCAAGAGGCTATTGCCAAGGTCCTGAAGCGAGATGCTCACCTGCGCCAGCTGGAGGAGGGACGGGTCAGGAAGAAGGGCTCCAGGGGAGACCAGGCTCAGGGCAGCGATGCGGAAGCTGAGGCTGCTGGGAAAGAGACCGAAGAGGCGCTGGAGCCCAGGCTCCCCATGGACGAGGACCCCCAAGAGAGGTTCAGCGAGGCTGAGGGACCTGATTTCCCCTCACCATATGTCCCCCCAAAGGCTTCAGATCATGAGGAGGAGCCCCAGGCCCAAGAAGCCCCTGGCCCCGGGGGCGTTCAGGTCTTCGCCGCCGAGGAGGCTGACCCCGATCTGGAGCCTCCGTCGAGGGGAGAGGAGGAGCCGCAGCCCCCGCCTGCCCAGACCCAGGAGGCGTCCGAGATCCTGGAGAATGGGGAGGAGGCCCCGGGGCCCGACCTGTCACTCGACCGCGTGCTCAGCAGCAGCTCCTCCATGTCCAGCCTCAACTCCTCCACGCTGAGCAGCAGCCAAATGAGCCTGTCCGGGGAGGCGGAGGCGGGCGCGGTGCAGGTCCGCGGCTCCCTGCACTTCGCGCTGCGCTACGAGCCGGATGCCGCCGAGCTGCGCGTGCACGTGATCCAGTGCCAGGGCCTGGCCGCCGCCCGGCGCCGCCGCTCCGACCCCTACGTCAAAAGCAAACTCCTCCCGGATAAGCAGAGCAAGCGCAAGACCTCAGTGAAGAAACGGAATCTGAACCCGGTCTTCAACGAGACTCTCTGGTACTCCGTCCCGCAGGCCGAGCTCCGGGGCCGCGTGCTGAGCCTGTCCGTGTGGCACCGCGAAAGCCTGGGTCGCAACATCTTTCTGGGCGAAGTCGAAGTGCCCCTGGACACGTGGGACTGGGACTCCGAGCCCACCTGGCTCCCCCTGCAGCCCCGGGTCCCGCCCTCTCCCAACGACCTTCCCAGCCGCGGACTGCTCTCTCTGTCCCTCAAGTACGTGCCCGCTGGCTCTGAGGGCGCAGGACTGCCCCCGAGCGGGGAGCTGCACTTCTGGGTGAAGGAAGCTCGGGACCTCGTGCCTCTGCGCCCAGGATCCCTGGATACCTACATACAATGTTTGGTGCTGCCTGATGACAGCCGGGCCAGCCGCCAACGGACAAGGGTGGTGCGACGCAGCCTCAGCCCCATGTTCAATCACACCATGGTTTATGATGGCTTCGGCCCTGCTGACCTGCGCCAGGCGTGTGCTGAGCTCTCTCTCTGGGACCATGGGCCCCTGGCCAGTCGCCAGCTGGGGGGCACACGCCTCAGCCTGGGCACCGGCAGCAGCTATGGGCTCCAGGTGCCCTGGATGGACTCCACACCTGAGGAGAGGCAGCTGTGGCAGACCCTCCTGGAGCGGCCATGTGTGTGGGTGGATGGCCTTCTGCCCCTCAGAACCAACCTGGCCCCCAGGACATAG

Related Sequences

bmy_01999T0 Protein

Length: 522 aa      View alignments
>bmy_01999T0
MPQRGHPSQKGFWSLPGLLMAHEPQPEADGLLDLSFLTEEEQEAIAKVLKRDAHLRQLEEGRVRKKGSRGDQAQGSDAEAEAAGKETEEALEPRLPMDEDPQERFSEAEGPDFPSPYVPPKASDHEEEPQAQEAPGPGGVQVFAAEEADPDLEPPSRGEEEPQPPPAQTQEASEILENGEEAPGPDLSLDRVLSSSSSMSSLNSSTLSSSQMSLSGEAEAGAVQVRGSLHFALRYEPDAAELRVHVIQCQGLAAARRRRSDPYVKSKLLPDKQSKRKTSVKKRNLNPVFNETLWYSVPQAELRGRVLSLSVWHRESLGRNIFLGEVEVPLDTWDWDSEPTWLPLQPRVPPSPNDLPSRGLLSLSLKYVPAGSEGAGLPPSGELHFWVKEARDLVPLRPGSLDTYIQCLVLPDDSRASRQRTRVVRRSLSPMFNHTMVYDGFGPADLRQACAELSLWDHGPLASRQLGGTRLSLGTGSSYGLQVPWMDSTPEERQLWQTLLERPCVWVDGLLPLRTNLAPRT*