Sequence detailsbmy_02002 (Coding sequence)

Part of scaffold_49 (SequenceType object (1))

For more information consult the page for scaffold_49 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC9A1ENSTTRG00000000289 (Bottlenosed dolphin)

Gene Details

solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000271, Bottlenosed dolphin)

Protein Percentage 70.11%
cDNA percentage 71.78%
Ka/Ks Ratio 0.29891 (Ka = 0.0931, Ks = 0.3116)

SLC9A1ENSBTAG00000008766 (Cow)

Gene Details

sodium/hydrogen exchanger 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000048292, Cow)

Protein Percentage 88.48%
cDNA percentage 87.43%
Ka/Ks Ratio 0.143 (Ka = 0.0807, Ks = 0.5642)

SLC9A1 (Minke Whale)

Gene Details

solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1

External Links

Gene match (Identifier: BACU003239, Minke Whale)

Protein Percentage 91.25%
cDNA percentage 92.18%
Ka/Ks Ratio 0.30967 (Ka = 0.0631, Ks = 0.2039)

Additional orthologs identified in other species via the OPTIC pipeline.

SLC9A1 (Human)   Slc9a1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2373 bp    Location:548252..574776   Strand:+
Raw sequence 
>bmy_02002
ATGGATGCCTCGGGCACCTGCTTAGGGGGAAGCTCCAGCAGCTTAACCGCAGGGACTCTGCTGCCGAGGTTTCAGGGAACCTGCATCCGCGGGGCCCCAGCCGCATCCACAGCTCTCAAGATCTGTACTCAGCTCCCCCTCCCTCCTCTGCGGCAGCTGAAAATGGGGCGCCAGGACTTGCTTTCTGCACGGCTGTTGTCCTGGAAATGGTGTGGGGCAGACTGGTGCTTGGAGCTCCTGCTGCTGTCTCCCACGCCTCCCATTCTCTCCCCCTCTGCAGGTTTCCATGTGATCCCCACCATCTCGAGCATTGTCCCGGAGAGCTGCCTGCTGATCGTGGTGGGGCTGCTGGTGGGGGGCCTGATCAAGGGCGTGGGTGAGACGCCCCCCTTCCTGCAGTCAGACGTCTTCTTCCTCTTCCTGCTGCCGCCTATCATCCTGGATGCGGGCTACTTCCTGCCGCTGCGGCAGTTCACAGAGAACCTGGGCACCATCCTGATCTTCGCTGTGGTGGGCACGCTGTGGAATGCCTTCTTCCTGGGCGGCCTCATGTACGCCGTGTGCCTGGTGGGCGGCGAGCAGATCAACAACATCGGCCTCCTGGAAAACCTGCTCTTCGGCAGCATCATTTCAGCCGTGGACCCCGTGGCCGTGCTGGCCGTCTTCGAGGAAATTCACATCAATGAGCTGCTGCACATCCTTGTCTTCGGGGAGTCCCTGCTCAATGACGCCGTCACTGTGGTCCTGTATCACCTCTTTGAGGAGTTTGCCAACTACGACCGCGTGGGCATCGTGGACATCGTCCTCGGCTTCCTGAGCTTCTTCGTGGTGTCCCTGGGCGGGGTGTTTGTGGGCGTGGTCTACGGGGTCATCGCAGCCTTCACCTCCCGGTTCACTTCCCACATCCGCGTCATCGAGCCGCTCTTCGTCTTCCTCTACAGCTACATGGCCTACCTGTCAGCCGAGCTCTTCCACCTGTCGGGCATCATGGCACTCATTGCCTCGGGAGTGGTGATGCGCCCCTACGTGGAGGCCAACATCTCCCACAAGTCCCACACGACCATCAAGTATTTCCTGAAGATGTGGAGCAGTGTCAGCGAGACCCTCATCTTCATCTTCCTCGGCGTCTCCACCGTGGCCGGCTCCCACCACTGGAACTGGACCTTTGTCATCAGCACCCTGCTCTTCTGCCTCATCGCCCGAGTGCTGGGCGTGCTGGGCCTGACCTGGTTCATCAACAAGTTCCGCATCGTGAAGCTGACCCCCAAGGACCAGTTCATCATTGCCTACGGGGGCCTGCGAGGGGCCATCGCCTTCTCCCTGGGCTACCTCCTGGACAAGAAGCACTTTCCCATGTGTGACCTGTTCCTCACGGCCATCATCACCGTCATCTTCTTCACCGTCTTTGGCATGACCATTCGGCCCCTGGTAGACCTGCTGGCTGTGAAGAAAAAGCAAGAAACGAAGCGCTCTATCAACGAGGAGATCCACACACAGTTCCTGGACCACCTTCTGACAGGCATCGAGGACATCTGTGGCCACTACGGCCACCACCACTGGAAGGACAAGCTCAATCGGTTTAATAAGAAGTATGTGAAGAAGTGTCTGATAGCTGGCGAGCGCTCCAAGGAGCCCCAGCTTATCGCTTTCTACCACAAGATGGAGATGAAGCAGGCTATCGAGCTGGTGGAAAGTGGGGGCATGGGCAAGATCCCCTCTGCCGTCTCCACCGTCTCCATGCAGAACATCCACCCCAAGTCCCTGCCTGCCGAGCGCATCTTGCCAGCACTCTCCAAGGACAAGGAAGAGGAGATCCGCAAAATCCTGAGGAATAACTTGCAGAAGACCAGGCAGCGGCTGCGGTCCTACAACAGACACACGCTGGTGGCAGACCCCTACGAGGAGGCCTGGAACCAGATGCTGCTCCAGAGACAGAAGGCCCGGCAACTGGAGCAGAAGATCAACAACTACCTGACGGTGCCGGCCCACAAGCTGGACTCGCCCACCATGTCGCGGGCCCGCATTGGCTCAGACCCGCTGGCCTATGAGCCGAAGGCCGACTTGCCTGCGATCACCATCGACCCAGCCTCCCCGCAGTCGCCCGAGTCTGTGGACCTGGTGAACGAGGAGCTGAAGGGCAAGGTCTTGGGGCTGAGCCGGGATCCAGGAAGGGTGGCCGAGGAGGACCACGAGGACAACGACAGGGGCATCATGATGCGGACCAAGGAGCCCTCGTCCCCAGGCACCGACGACGTCTTCAGCCCTGCGCCGAGTGACAGCCCCAGCTCCCAGAGGATACAGCGCTGCCTCAGTGACCCAGGCCCCCATCCTGAGCCTGGGGAGGGAGAGCCTTTCATCCCCAAGGGCCAGTAG

Related Sequences

bmy_02002T0 SequenceType object (3)

Length: 791 aa      View alignments
>bmy_02002T0
MDASGTCLGGSSSSLTAGTLLPRFQGTCIRGAPAASTALKICTQLPLPPLRQLKMGRQDLLSARLLSWKWCGADWCLELLLLSPTPPILSPSAGFHVIPTISSIVPESCLLIVVGLLVGGLIKGVGETPPFLQSDVFFLFLLPPIILDAGYFLPLRQFTENLGTILIFAVVGTLWNAFFLGGLMYAVCLVGGEQINNIGLLENLLFGSIISAVDPVAVLAVFEEIHINELLHILVFGESLLNDAVTVVLYHLFEEFANYDRVGIVDIVLGFLSFFVVSLGGVFVGVVYGVIAAFTSRFTSHIRVIEPLFVFLYSYMAYLSAELFHLSGIMALIASGVVMRPYVEANISHKSHTTIKYFLKMWSSVSETLIFIFLGVSTVAGSHHWNWTFVISTLLFCLIARVLGVLGLTWFINKFRIVKLTPKDQFIIAYGGLRGAIAFSLGYLLDKKHFPMCDLFLTAIITVIFFTVFGMTIRPLVDLLAVKKKQETKRSINEEIHTQFLDHLLTGIEDICGHYGHHHWKDKLNRFNKKYVKKCLIAGERSKEPQLIAFYHKMEMKQAIELVESGGMGKIPSAVSTVSMQNIHPKSLPAERILPALSKDKEEEIRKILRNNLQKTRQRLRSYNRHTLVADPYEEAWNQMLLQRQKARQLEQKINNYLTVPAHKLDSPTMSRARIGSDPLAYEPKADLPAITIDPASPQSPESVDLVNEELKGKVLGLSRDPGRVAEEDHEDNDRGIMMRTKEPSSPGTDDVFSPAPSDSPSSQRIQRCLSDPGPHPEPGEGEPFIPKGQ*