Sequence details bmy_02004 (Coding sequence)

Part of scaffold_49 (Scaffold)

For more information consult the page for scaffold_49 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

C1orf172 ENSTTRG00000016687 (Bottlenosed dolphin)

Gene Details

chromosome 1 open reading frame 172

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015817, Bottlenosed dolphin)

Protein Percentage 98.74%
cDNA percentage 98.74%
Ka/Ks Ratio 0.17465 (Ka = 0.0058, Ks = 0.033)

MGC159903 ENSBTAG00000019252 (Cow)

Gene Details

uncharacterized protein C1orf172 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025631, Cow)

Protein Percentage 95.73%
cDNA percentage 93.05%
Ka/Ks Ratio 0.05363 (Ka = 0.0185, Ks = 0.3451)

Additional orthologs identified in other species via the OPTIC pipeline.

C1orf172 (Human)   1810019J16Rik (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1197 bp    Location:677071..679743   Strand:+
Raw sequence 
>bmy_02004
ATGCCCCGCCCTGGACACCCCCGCCCATCATCTGGGCCCCCACGCTTGGGACCCTGGGAGCGGCCAACGGAGCTATGCCTGGAGACATATGACGAGCCATCCTGGGCCCCACCGAGCCGCCGCACCCGTAGGCCAGACCCCAAGGACCCCGGCCACCATGGACCCGAGAGCCTTACCTTCATCTCTGGCTCTGCTGAGCAGGCTGCTGAGCCCCCAGCCTGCTGCCTGCTCTGGCGACCCTGGGTGTGGGACTGGTGCCGGGCTGCCTTCTGCTTCCGCCGCTGCCGGGATTGCCTCCAGCGCTGTGGAGCCTGTGTGCGGGGCTGCAGCCCCTGCTTGTCCGCTGGGGACTCCCCTGAAGGGGCTGCTGAAGCCAACTGGGTCAAGGAGCACAACGGAGTGCCCCCCAGCCCTGACCGTGCCCCTCCCAGCCGGCGGGATGGCCAGCGGCTCAAGTCGGCCATGGGTAGCAGCTTCAGCTACCCTGACGTCAAGCTCAAAGGCATTCCTGTGTATCCCTACCGCAGCACCACCTCCCCAGCCCCGGACGCGGACTCCTGCTGCAAGGAGCCACTGGCCGACCCCCCACCCATACGGCACAGCCTGCCCAGCACCCTTGCCAGCAGTCCCCGAGGCTCTGAGGAGTACTACTCCTTCCACGAGTCRGACCTGGACCTGCCTGAGATAGGCAGTGGCTCCATGTCCAGCCGAGAGATCGATGTGCTCATCTTCAAGAAGCTGACAGAGCTGTTCAGTGTACACCAGATCGACGAGCTGGCCAAGTGCACCTCAGACACTGTGTTCCTGGAGAAGACCAGTAAGATATCGGACCTTATCAGCAGCATCACCCAGGACTACCACCTGGATGAGCAGGACGCTGAGGGCCGCCTGGTACGCGGCATCATTCGCATCAGTACCCGAAAGAGCCGTGCCCGCCCGCAGACCACAGAGGGGCGCTCAACCAGGGTGGCTGCCTCTGCTGCCCCTGCCCCTGACAGTGGCCATGAGACCATGGTGGGCTCAGGGCTCAGCCAGGATGAACTCACAGTGCAGATATCCCAGGAGACGACCGCAGATGCCATCGCCAGGAAGCTGAGGCCTTATGGAGCCCCAGGATACCAAGCCAGCCACGACTCATCCTTCCAGGGCACTGACACAGACTCTTCAGGGGCACCCCTGCTCCAGGTCTACTGCTAA

Related Sequences

bmy_02004T0 Protein

Length: 399 aa      View alignments
>bmy_02004T0
MPRPGHPRPSSGPPRLGPWERPTELCLETYDEPSWAPPSRRTRRPDPKDPGHHGPESLTFISGSAEQAAEPPACCLLWRPWVWDWCRAAFCFRRCRDCLQRCGACVRGCSPCLSAGDSPEGAAEANWVKEHNGVPPSPDRAPPSRRDGQRLKSAMGSSFSYPDVKLKGIPVYPYRSTTSPAPDADSCCKEPLADPPPIRHSLPSTLASSPRGSEEYYSFHESDLDLPEIGSGSMSSREIDVLIFKKLTELFSVHQIDELAKCTSDTVFLEKTSKISDLISSITQDYHLDEQDAEGRLVRGIIRISTRKSRARPQTTEGRSTRVAASAAPAPDSGHETMVGSGLSQDELTVQISQETTADAIARKLRPYGAPGYQASHDSSFQGTDTDSSGAPLLQVYC*