Sequence details bmy_02007 (Coding sequence)

Part of scaffold_49 (Scaffold)

For more information consult the page for scaffold_49 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GPATCH3 ENSTTRG00000016677 (Bottlenosed dolphin)

Gene Details

G patch domain containing 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015811, Bottlenosed dolphin)

Protein Percentage 87.04%
cDNA percentage 88.14%
Ka/Ks Ratio 0.42854 (Ka = 0.0213, Ks = 0.0498)

GPATCH3 ENSBTAG00000014849 (Cow)

Gene Details

G patch domain-containing protein 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019773, Cow)

Protein Percentage 89.92%
cDNA percentage 91.6%
Ka/Ks Ratio 0.26682 (Ka = 0.0545, Ks = 0.2043)

GPATCH3  (Minke Whale)

Gene Details

G patch domain containing 3

External Links

Gene match (Identifier: BACU003234, Minke Whale)

Protein Percentage 97.71%
cDNA percentage 98.41%
Ka/Ks Ratio 0.23805 (Ka = 0.0092, Ks = 0.0386)

Additional orthologs identified in other species via the OPTIC pipeline.

GPATCH3 (Human)   Gpatch3 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2904 bp    Location:716876..736527   Strand:+
Raw sequence 
>bmy_02007
ATGGCGGCGTCCAGCGCGGCGGAGGAGGCGGCAGTTTACTTAATAGTGAGCGGTATCCCGGCGGAGTTGCGCTCAGCCCAGCTACGGAGCTACTTTAGCCAGTTCCGGGAACAGCGCGGCTGTGGCTTCCTCTGTTTCCACTACCGGCATCGGCCTGAGCGGGCCCCTCCCCAGGCTGCTCCAGACTCTACCCTAACCCCTATCCGCCAGGGTCTCGCCCAGACTTCACTCAACGATGCCCGCACTCTCTCCACTCAGGACTCTGCTCCCGCCCAGACCCGCACCTGCTGCTGCGTCATCTCGGTACGGGGGCCARCTCAAGCCCAGAGGTTTCTCCGTATGTACTCGGGCCGCCGGTGGCTGGATTCTCAGGGGACTTGGTTACCTGGTCGTTGTTTCATCCGCAGACTTCGGCTACCTACTGAGGCATCAGGTTTGGACTCCTTTCCCTTCAAGACCCGGAAGGAACTGCAGAGTCGGAAGGCTGAGAGTGAAGCCTTCACGCTGGCCGACCTGAGGCAACTGCCAGAGCTGAACCCACCGGTGCTGATGCCCAGTGGAAATGTGGGGACTCCCCTGCGGGTCTTTTTGGAGTTGATCCGGGCCTGCCGTCTACCCCCTCGGATCATCACCCAGCTGCAGCTCCAATTCCCCAAGACAGGTTCCTCCCGGCGCTACGGCAATGTGCCCTTCAAGTATGACGACTCAGAGACTGTGGAGCAGGAAGAGCTTGTGTACACAGCCGAGGGTGAGGAAATACCCCAGGGAACCTGCTTGGCAGACGTACCAGCCAACCCCTGTGGAGAGCCAGAGGAAGAAGAGGAAGAGGAAGAAGAGTCACACTCAGATGACGACGACGACCGGGGTGAGGAGTGGGAGCGGCACGAAGCGCTGCATGAGGACGTGACCGGGCAGGAGCGGACCACTGAGCGGCTCTTTGAGGAGGAGATCGAGCTCAAGTGGGAGAAGGGCGGCTCAGGCCTGGTGTTCTACACTGACGCCCAATTCTGGCAGGAAGAGGAAGGAGACTTTGATGAACAGACAGCCGATGACTGGGATGTGGATATGAGTGTGTACTACGATGCAGATGGTGGAGACAAGGATGCCCGAGACTCTGTCCAAATTCGTCTGGAACGGAGACTCCGTGATGGCCAGGAGGCCGGCTCCGTGATCGGATACCAGATGGGCACCTTCGAGCGCCACACCAAGGGCATTGGGCGGAAGGTGATGGAGCGGCAGGGCTGGGCCGAGGGCCAGGGCCTGGGCAGCGGGTGCTCAGGGGTGCCCGAGGCCCTGGATAGTGACGGCCAGCACCCCAGATGCAAGCGTGGATTGGGGTACCATGGAGAGAAGCTCCAGCCCTTTGGGCAACCGAAGAGGCCCCGTGGAACTGGCTTAGGGCTCATCTCCACCATCTACGATGAGCCCCTACCCCAGGACCAGGGGGAGTCGCTGCTCCGCCGCCAGCCACCCACCAGCATGAAGTTTCGCACAGATATGGCTTTTGTGAGGGGTTCCAGCTGTGCCTCGGACAGCCCCTCAGAGCCTGCGTGGCAGTCCCTGTATGGGCTTGCTCCTGTTGCCTCCCCCAGCACCCTGAAAACTGGATTGACTGAGGTCATCGTCACAACCTTCCTGGGGGCAAGGAGAGGGTGGGAGAGGGTTCAGCATGAAGCCCAGAAAGAGGGGAAAAGGGACATGGAAGAGGAGAGGATTTGTGGTTGGAAGAGACGGTCTTGGGGCGGGCCCTCCATCGCCTCTACCCTTAACTGGCTGGCACCGGGCAGCGGAGGGTCCGCTGCAGGTGTCCCGGGTCTGCGACCTGACGAGAGAATAAAAAAGCCCCCACGTCCGCCCCACGCACTGACGTCACCACGCCCTTCGGCGCCAAGCTGTGTCGTCACCGCATGGGCGGGACTTCCTCTCCCGGCCCTGCCGTTTCCGACGTCGTCCGGAAGTCGGGTGCTGGTCCCGTTAGTACCTGGACATTTGGTCGCCTCACATCACGCGGGTGCCTGCTTTTCCTCCTTAGGCGACCCCCGGGCATCACCGCCGGCCCCCGACGAAGTGCACGTCGGGGATCCCGTTGCCCTCGGCTCTCGTCTCCGGCTTGGCTCCCGCCCTGCTTCCCTGCCGAGCTTACCTGCTCCGCACGGGGCCGTGTGCCGGCTGCCCATGGCGGGGGCCGCTCCGACCACGGCCTTTGGGCAGGCGGTTATCGGCCCTCCGGGCTCGGGGAAGACCACGTACTGCCTGGGCATGAGTGAGTTTCTGCGCGCGCTGGGCCGGCGTGTGGCGGTAGTGAACCTGGACCCGGCCAATGAGGGGCTGCCGTACGAGTGCGCCGTGGACGTGGGCGAGCTGGTGGGGCTGGGCGACGTGATGGACGCGCTGCAGCTGGGGCCCAACGGCGGCCTGCTGTACTGCATGGAGTACCTGGAGGCCAACCTGGACTGGTTGCGTGCCAAGCTCGACCCCCTCCGCGGCCACTACTTCCTCTTCGACTGCCCTGGCCAAGTGGAGCTCTGCACGCACCACGGAGCCCTGCGCAGCATCTTCTCCCAGATGGCGCAGTGGGACCTCAGGCTGACTGCTGTCCACCTGGTGGATTCTCACTATTGCACAGACCCTGCCAAGTTCATCTCGGTACTGTGTACCTCCCTGGCCACCATGCTGCATGTGGAGCTGCCCCATGTCAACCTCCTCTCCAAGATGGACCTCATTGAACACTATGGGAAGCTGGCCAATGGCTACTGCTTTGGGGTCCAGGAGCAGCGGAGCCTGGAGGCCGTGATGTCTGCCGCGGTGGGAGCTGACTTCCACTTCTCCTCCACCCTGGGCCTGCAGGAGAAGTACCTGGCGCCCTCAGAGCAGTCAGTGGAGCAGGAGGCCATGCAGCTGTAG

Related Sequences

bmy_02007T0 Protein

Length: 968 aa      View alignments
>bmy_02007T0
MAASSAAEEAAVYLIVSGIPAELRSAQLRSYFSQFREQRGCGFLCFHYRHRPERAPPQAAPDSTLTPIRQGLAQTSLNDARTLSTQDSAPAQTRTCCCVISVRGPXQAQRFLRMYSGRRWLDSQGTWLPGRCFIRRLRLPTEASGLDSFPFKTRKELQSRKAESEAFTLADLRQLPELNPPVLMPSGNVGTPLRVFLELIRACRLPPRIITQLQLQFPKTGSSRRYGNVPFKYDDSETVEQEELVYTAEGEEIPQGTCLADVPANPCGEPEEEEEEEEESHSDDDDDRGEEWERHEALHEDVTGQERTTERLFEEEIELKWEKGGSGLVFYTDAQFWQEEEGDFDEQTADDWDVDMSVYYDADGGDKDARDSVQIRLERRLRDGQEAGSVIGYQMGTFERHTKGIGRKVMERQGWAEGQGLGSGCSGVPEALDSDGQHPRCKRGLGYHGEKLQPFGQPKRPRGTGLGLISTIYDEPLPQDQGESLLRRQPPTSMKFRTDMAFVRGSSCASDSPSEPAWQSLYGLAPVASPSTLKTGLTEVIVTTFLGARRGWERVQHEAQKEGKRDMEEERICGWKRRSWGGPSIASTLNWLAPGSGGSAAGVPGLRPDERIKKPPRPPHALTSPRPSAPSCVVTAWAGLPLPALPFPTSSGSRVLVPLVPGHLVASHHAGACFSSLGDPRASPPAPDEVHVGDPVALGSRLRLGSRPASLPSLPAPHGAVCRLPMAGAAPTTAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDVMDALQLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQMAQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHVNLLSKMDLIEHYGKLANGYCFGVQEQRSLEAVMSAAVGADFHFSSTLGLQEKYLAPSEQSVEQEAMQL*