Part of scaffold_49 (Scaffold)

For more information consult the page for scaffold_49 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ARID1A ENSTTRG00000016408 (Bottlenosed dolphin)

Gene Details

AT rich interactive domain 1A (SWI-like)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015553, Bottlenosed dolphin)

Protein Percentage 70.98%
cDNA percentage 72.56%
Ka/Ks Ratio 0.66913 (Ka = 0.0877, Ks = 0.131)

ARID1A ENSBTAG00000001024 (Cow)

Gene Details

AT-rich interactive domain-containing protein 1A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001360, Cow)

Protein Percentage 89.89%
cDNA percentage 90.07%
Ka/Ks Ratio 0.37703 (Ka = 0.0767, Ks = 0.2034)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5148 bp    Location:852345..802864   Strand:-
>bmy_02012
ATGAGAATGATTTATGCTGGTCAGCTCACGTGTATCGGGGTGCAAAGGGTGGTTCTCTCTATGGAATCTACTCTGTCCTTCCTCAGACTGAGTGTGGGGCCACGTGGAGCTTGCGGGAAGCTGAGAGCACGAGAGTATATAGCAGGGGGCCCGACTTCCCTGATCAAGGGGGCAGCATTTTCCTCTCAATTATGTGTCTTTGTGGCAGAGCCTTTGCTTTTGAAGTGTAATCACATCTGCAAGGAATTTCTAAAGTTAATGGAAGAATCCTTGAACCCTTTAGTAGCTGTCCTCAATTGGGAGTGCAGGCACCCTGATCCATCCAGTCCAATGGATCAGATGGGCAAGATGAGACCTCAGCCATACGGCGGGACTAACCCATACTCGCAACAACAGGGACCTCCATCAGGACCGCAGCAAGGACATGGGTACCCAGGGCAGCCATATGGGTCCCAGACCCCGCAGCGGTACCCGATGACCATGCAGGGCCGAGCGCAGAGTACCATGGGCGGCCTCTCTTATGCACAGCAGTGTAAATTTTCTGCGAATGAATGTAGTCCACGTCAGAACAAACCAACTAGGAACCCAGCCTGGCTGTCCTTCCTGGCTCAGTTTAACAGGATTCCACCTTATGGACAGCCAGGCCCCAGCGGGTATGGTCAGCAGGGCCAGGCTCCGTATTACAACCAGCAAAGCCCTCACCCCCAGCAGCAGCAGCAGCCCTACTCCCAGCAGCCACCATCCCAGACCCCTCACGCCCAGCCTTCATATCAGCAGCAGCCTCAGTCTCAGCCACCGCAGCTCCAGTCCTCTCAGCCTCCGTATTCCCAGCAGCCATCCCAGCCCCCCCATCAGCAGTCCCCAACCCCGTACCCCACCCAGCAGTCCACCACCCAGCAGCACCCCCAGAGCCAGCCCCCCTACTCACAGCCGCAGGCACAGTCTCCTTACCAGCAGCCGCCACCTCAGCAGCCAGCATCCTCGACGCTTTCCCAGCAGGCTGCGTACCCTCAGCCCCAGTCTCAGCAGTCACAGCAAACTGCCTATTCTCAGCAGCGCTTCCCTCCACCACAGGAGTTATCTCAAGATTCATTTGGGTCTCAGGCATCCTCAGCCCCCTCAATGACCTCCAGTAAGGGAGGGCAAGAAGATATGAACCTGAGTCTTCAGTCAAGACCTTCAAGCTTGCCTTCAGAACTGTGTAACCACTCCCTCATCATCTATGGTCTGTGGCTGAATCTGGGTGAGGTACTATTGTGGCAAGAATCCAAATCGGTGGATTTCTACCAGTGCTTTTGTCCCCAGTCCTGCTACAGGAAGCTGGTGGTTCATTACTTCAACCAGAAATTGGCCTTCAGGGCTGTCTTTTCTGGTTTAGGATTCTATCCATTTCCCACTCTCAGATTTGATCTGTCTGGTTCAATAGACGATCTCCCCATGGGGACAGAAGGAGCTCTGAGCCCTGGAGTGAGCACATCAGGGATTTCAAGCAGCCAAGGGGAGCAGAGTAATCCAGCTCAGTCTCCTTTTTCTCCCCATACCTCCCCTCACCTGCCTGGCATCCGAGGCCCCTCCCCGTCCCCAGTCGGCTCTCCTGCCAGTGTTGCTCAGTCTCGCTCAGGACCACTCTCGCCTGCTGCAGTGCCAGGCAACCAGATGCCACCTCGGCCACCCAGTGGCCAGTCGGACAGCATCATGCATCCTTCTATGAACCAATCAAGCATTGCCCAAGATCGAGGTTACATGCAGAGGAACCCCCAGATGCCCCAGTACAGTTCCCCCCAGCCCGGGTCGGCCTTATCTCCACGTCAGCCTTCTGGAGGACAGATGCACACAGGCATGGGCTCCTACCAGCAGAACTCCATGGGGAGCTATGGTCCCCAGGGGAGTCAGTACGGCCCACAGGGAGGCTACCCCAGGCAGCCAAACTATAATGCCTTGCCCAATGCTAACTACCCCAGTGCAGGCATGGCTGGAAGCATGAACCCTATGGGTGCTGGAGGTCAGATGCATGGGCAGCCTGGCATCCCACCTTATGGCACACTCCCTCCAGGGAGAATGAGTCATGCCTCCATTGGCAACCGGCCTTATGGCCCTAACATGGCCAATATGCCACCTCAGGTTGGGTCAGGGATGTGTCCCCCACCAGGGGGCATGAACCGGAAAACTCAAGAAACTGCTGTCGCCATGCACGTTGCTGCCAACTCTATCCAGAACAGGCCACCAGGCTACCCCAGTATGAATCAAGGGGGCATAATGGGAACTGGACCTCCCTATGGACAAGGGATTAATAGTATGGCTGGCATGATCAACCCTCAGGGACCCCCATATCCCATGGGTGGAACCATGGCCAACAATTCAGCAGGGATGGCAGCCAGCCCAGAGATGATGGGTCTTGGGGATGTCAAGTTAACTCCAGCCACCAAAATGAACAACAAAGCAGATGGGACACCCAAGACGGAATCTAAATCCAAGAAATCCAGTTCTTCTACTACAACCAATGAGAAGATCACCAAGTTGTATGAGCTGGGTGGTGAGCCTGAGAGGAAGATGTGGGTGGACCGTTATCTGGCCTTCACGGAGGAGAAGGCCATGGGCATGACAAATCTGCCTGCTGTGGGTAGGAAACCTCTGGACCTGTACCGCCTCTATGTGTCTGTGAAGGAAATTGGTGGATTGACTCAGGTCAACAAGAACAAAAAATGGCGGGAACTTGCGACCAACCTCAATGTCGGCACCTCAAGCAGTGCTGCCAGCTCCTTGAAAAAGCAGTACATCCAATGTCTCTATGCCTTTGAGTGCAAGATCGAACGGGGAGAAGACCCTCCCCCAGACATCTTTGCAGCTGCTGATTCCAAGAAGTCCCAGCCCAAGATCCAGCCTCCCTCTCCTGCGGGATCAGGGTCAATGCAGGGGCCACAGACACCTCAGTCAACCAGCAGTTCCATGGCAGAAGGGGGAGACCTGAAGCCACCAACTCCAGCATCCACACCACACAGCCAGATCCCCCCCTTGCCAGGCATGAGGGCGGTCCCCGCTCTGCCTGTCCAACCAGTGACTCCCATGTGCCTTGCATTATCGGAGGAATTCCTTTATTTGGGGTCTAATTGGCTTTCCTCACTCTGGAGCAGGAGCAATTCGGTCGGGATCCAGGATGCCTTTCCTGATGGAAGTGACCCCACATTCCAAAAGCGGAATTCCATGACTCCAAACCCTGGGTACCAGCCCAGTATGAATACCTCTGACATGATGGGGCGCATGTCCTACGAGCCAAATAAGGATCCTTATGGCAGCATGAGGAAAGCTCCAGGGAGTGATCCCTTCATGTCCTCAGGTCAGGGCCCTAACGGCGGGATGGGGGACCCCTACAGTCGAGCTGCCGGCCCTGGGCTGGGAAATGTGGCAATGGGACCGCGACAGCACTATCCCTATGGAGGTCCTTATGACAGAGTGAGGACGGAGCCCGGAATAGGACCCGAGGGAAACATGGGCACTGCAGCCCCACAGCCGAATCTCATGCCTTCCAACCCAGACTCGGGGATGTATTCTCCTAGCCGTTACCCCGCGCAGCCGCAGCCGCAGCCGCAGCCGCAGCAGCAACGACATGATTCCTATGGCAATCAGTTCTCCGCTCAAGGCACCCCTTCCAGCAGCCCCTTCCCCAGCCAGCAGACCACAATGTATCAGCAGCAGCAGCAGGTGAGGAGGGTAGCGGGTGAGCTGACACACAGGTTCCCCCGAGAGCCAGTTAGAAGGCTAAGTTGTGCAGTCTGTGAAGCCCACTTTAGATTCTTTGGTGTTCTTCTCCCACCCCGACGGCCGGTTCTGTCTGAAGAGCCAGGCCCTCAGTCTCTTCCCTGTTTGGAGTCTAGTCCCGTCTCTCGTTCTCCAAAAGGAGGGGCAGAAGTAAGCCCAGCAGGTGTCTGGTGTAGCATCTGGGCAGCGAATTACAAGCGGCCGATGGATGGCACATACGGCCCTCCTGCCAAGCGGCACGAAGGGGAGATGTACAGTGTGCCATACAGCACGGGGCAGGGGCAGCCCCAGCAGCAGCAGTTGCCCCCAGCCCAGCCCCAGCCTGCCAGCCAGCAACAAGCTGCTCAGCCTTCCCCTCAGCAAGATGTGTACAACCAGTATGGCAATGCCTATCCTGCCACTGCCGCCGCTGCTACTGAGCGCCGACCAGCAGGCGGCCCCCAGAACCAGTTTCCATTCCAGTTTGGCCGAGACCGTGTCTCAGCACCCCCTGGCTCCAGTGCCCAACAGAACATGCCACCGCAGATGATGGGCGGCCCCATACAGGCATCGGCTGAGGTTGCTCAGCAAGGCACCATGTGGCAGGGGCGTAATGACATGACCTACAATTACGCCAACAGGCAGAGCACGGGCTCTGCCCCGCAAGGCGCTGCCTATCATGGCGAGAACCGAACAGAGGAAATGCTGCACACGGATCAGAGAGCCAACCATGAAGGCCCATGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCTTCTGCCCCCATGCCCCCCATGACAAGGCCCCTCCATCCAACTACCAGCCCCCACCAAGCATGCAGAATCACATTCCTCAGCCCTGCTCCCCTGCCCCGGCCAATGGAGAACCGCACCTCTCCTAGCAAGTCTCCATTCCTGCACTCTGGGATGAAGATGCAGAAGGCAGGTCCYCCAGTACCTGCCTCACACATAGCACCTGCCCCTGTGCAGCCCCCTATGATCCGGCGGGACATCACCTTCCCACCTGGCTCTGTTGAAGCCACACAGCCTGTGTTGAAGCAGAGGAGGCGGCTCACGATGAAAGACATCGGAACCCCGGAGGCATGGCGGGTAATGATGTCCCTCAAGTCTGGGCTGCTGGCAGAGAGCACGTGGGCATTAGACACCATTAACATCCTGCTGTATGATGACAACAGCATCATGACTTTCAACCTCAGTCAGCTCCCAGGGTTGCTAGAGCTCCTTGTGGAATATTTCCGACGTTGCCTGATTGAGATCTTTGGCATTTTAAAGGAGTATGAGCTGCAGCGGCTGCGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCCCCTCCCAGCTACCCCTTTATAGTATGA

Related Sequences

bmy_02012T0 Protein

Length: 1716 aa      View alignments
>bmy_02012T0
MRMIYAGQLTCIGVQRVVLSMESTLSFLRLSVGPRGACGKLRAREYIAGGPTSLIKGAAFSSQLCVFVAEPLLLKCNHICKEFLKLMEESLNPLVAVLNWECRHPDPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSTMGGLSYAQQCKFSANECSPRQNKPTRNPAWLSFLAQFNRIPPYGQPGPSGYGQQGQAPYYNQQSPHPQQQQQPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPTPYPTQQSTTQQHPQSQPPYSQPQAQSPYQQPPPQQPASSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPSELCNHSLIIYGLWLNLGEVLLWQESKSVDFYQCFCPQSCYRKLVVHYFNQKLAFRAVFSGLGFYPFPTLRFDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQMHTGMGSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPNANYPSAGMAGSMNPMGAGGQMHGQPGIPPYGTLPPGRMSHASIGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMHVAANSIQNRPPGYPSMNQGGIMGTGPPYGQGINSMAGMINPQGPPYPMGGTMANNSAGMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMRAVPALPVQPVTPMCLALSEEFLYLGSNWLSSLWSRSNSVGIQDAFPDGSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMGTAAPQPNLMPSNPDSGMYSPSRYPAQPQPQPQPQQQRHDSYGNQFSAQGTPSSSPFPSQQTTMYQQQQQVRRVAGELTHRFPREPVRRLSCAVCEAHFRFFGVLLPPRRPVLSEEPGPQSLPCLESSPVSRSPKGGAEVSPAGVWCSIWAANYKRPMDGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATAAAATERRPAGGPQNQFPFQFGRDRVSAPPGSSAQQNMPPQMMGGPIQASAEVAQQGTMWQGRNDMTYNYANRQSTGSAPQGAAYHGENRTEEMLHTDQRANHEGPWPSHGTRQPPYGPSAPMPPMTRPLHPTTSPHQACRITFLSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYELQRLRCHVCIYMTLYIAHTLGSPQFGPPPSYPFIV*