Part of scaffold_49 (Scaffold)

For more information consult the page for scaffold_49 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM63 ENSTTRG00000005134 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 63, E3 ubiquitin protein ligase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004828, Bottlenosed dolphin)

Protein Percentage 77.56%
cDNA percentage 79.55%
Ka/Ks Ratio 0.3869 (Ka = 0.0215, Ks = 0.0557)

TRIM63 ENSBTAG00000005085 (Cow)

Gene Details

E3 ubiquitin-protein ligase TRIM63

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000037722, Cow)

Protein Percentage 94.63%
cDNA percentage 92.94%
Ka/Ks Ratio 0.08328 (Ka = 0.0272, Ks = 0.3268)

TRIM63  (Minke Whale)

Gene Details

tripartite motif containing 63, E3 ubiquitin protein ligase

External Links

Gene match (Identifier: BACU007578, Minke Whale)

Protein Percentage 99.44%
cDNA percentage 99.53%
Ka/Ks Ratio 0.14122 (Ka = 0.0023, Ks = 0.0163)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1194 bp    Location:1364183..1375597   Strand:+
>bmy_02029
TCAGGCTCCAGGAGAAGAAGGCAAAGAGGCTCCAGGCGGGTATTTTGTGACAAAGGCAAGACCCCAGATCTGCTTAGAGCGAGGCAGGTGAAGGAGACAGCCAGGTGGGTCCCCACGTCTCCTGACAATATGGATTATAAGTCAAGCCTGATCCAGGATGGGAACCCCATGGAGAACCTGGAGAAGCAGCTGATCTGCCCCATCTGCCTGGAGATGTTTACCAAGCCAGTGGTCATCTTGCCATGTCAACACAACCTCTGCCGGAAGTGTGCCTGTGACATATTCCAGCAGGCTGCAAATCCCTACTGGACCAACCGGGGTGGCTCGGTGTCCATGTCTGGAGGCCGTTTCCGATGCCCCTCCTGCCGCCATGAAGTGATCATGGACCGTCATGGAGTGTACGGCCTGCAGAGGAATCTGCTGGTGGAGAACATCATTGATATCTACAAGCAGGAGTGCTCCAGTCGGCCCCTGCAGAAAGGCAACCACCCCATGTGCAAGGAGCACGAAGATGAGAAAATCAACATCTACTGCCTCACATGTGAGGTGCCCACGTGCTCCATGTGCAAGGTGTTTGGGGTCCACAAGGCCTGCGAGGTGGCCCCACTGCAGAGTGTCTTCCAGGGACAAAAGACTGAGCTCAGTAACTGTATCTCCATGCTGGTAGCAGGGAACGACCGTATTCAGACCATCATCACTCAGCTGGAGGACTCCTGTCAAGTGACCAAGGAGAACAGCCACCAGGTGAAGGAAGAGCTGAGCCAGAAGTTCGACGTGCTGTACGCCATCCTGGACGAGAAGAAGAGTGAGCTGCTGCAGCGGATCACGCGGGAGCAGGAGGAGAAGCTCAGCTTCCACGAGGCCCTCATCCAGCAATACCGGGAGCAGCTGGAGAAGTCCACCAAGCTGGTGGAGACAGCCATCCAGTCCCTGGACGAGCCCGGCGGGGCCATCTTCCTCTTGAGTGCCAAGCAACTCATCAGAAGCATTGTGGAAGCGTCCAAGGGTTGCCAGCTGGGGAAGATAGAGCAGGGCTTTGAAAACATGGACTACTTTACTTTGGACTTAGAGCACATAGCAGACACCCTGAGGGCCATCGACTTTGGGACAGGTGAGGAAGAGGAGGAGTTTATTGAAGAAGAAAATCAGGAAGAGGAAGAGTCCACAGAGGGGAAGGAAGAAGGACACCAGTAA

Related Sequences

bmy_02029T0 Protein

Length: 398 aa      View alignments
>bmy_02029T0
SGSRRRRQRGSRRVFCDKGKTPDLLRARQVKETARWVPTSPDNMDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCACDIFQQAANPYWTNRGGSVSMSGGRFRCPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGNHPMCKEHEDEKINIYCLTCEVPTCSMCKVFGVHKACEVAPLQSVFQGQKTELSNCISMLVAGNDRIQTIITQLEDSCQVTKENSHQVKEELSQKFDVLYAILDEKKSELLQRITREQEEKLSFHEALIQQYREQLEKSTKLVETAIQSLDEPGGAIFLLSAKQLIRSIVEASKGCQLGKIEQGFENMDYFTLDLEHIADTLRAIDFGTGEEEEEFIEEENQEEEESTEGKEEGHQ*