Part of scaffold_49 (Scaffold)

For more information consult the page for scaffold_49 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LDLRAP1 ENSTTRG00000012427 (Bottlenosed dolphin)

Gene Details

low density lipoprotein receptor adaptor protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011787, Bottlenosed dolphin)

Protein Percentage 94.32%
cDNA percentage 96.34%
Ka/Ks Ratio 0.40977 (Ka = 0.0289, Ks = 0.0704)

LDLRAP1 ENSBTAG00000001050 (Cow)

Gene Details

low density lipoprotein receptor adapter protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001393, Cow)

Protein Percentage 90.53%
cDNA percentage 92.17%
Ka/Ks Ratio 0.21712 (Ka = 0.0511, Ks = 0.2355)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 834 bp    Location:1809449..1785495   Strand:-
>bmy_02040
ATGCTCTTCAGCCTCAAGTACCTGGGCATGACGCTGGTGGAGCAGCCCAAGGGTGAGGAGCTGTCAGCCGCCGCCGTCAAGAGGATCGTGGCCACGGCCAAGGCCAGTGGGAAGAAGCTGCAGAAGGTGACTCTCAAGGTGTCGCCACGGGGGATCATCCTGACCGACAGCATCACCAGCCAGCTCATTGAGAACGTGTCCATTTACAGAATCTCCTACTGCACAGCAGACAAGATGCATGACAAAGTGTTTGCGTACATCGCACAGAGCCAGCACAACGAGAATCTTGAGTGCCACGCTTTCCTCTGCACCAAGCGGAAGATGGCCCAGGCTGTCACCCTCACAGTAGCCCAGGCCTTCAAAGTCGCCTTTGAGTTTTGGCAGGGATGGAGTGCTGGGGTTGGGGGCCCCAACACGCTGTGCCTTGGTCCCACAGAGAAGGAGAAGAGGGAGAAAACCAGCCAAGACGGAGGGGACATCCTGGGTGGGGGCTGCCGAGACAGCACCCCTTCGCTGAAGAGCCTGGTCGCCACTGGGAACCTGCTGGACTTGGAAGAGACAGCCAAGGCCCCGCTGTCCACGGTCAGCGCTAACACCACTCACATGGACGAGGCACTGCGACCTCAAGCCTTAAACAGCAGCAACGTTGTCTGGGAGCTGGATGATGGCCTGGATGAAGCATTTTCAAGGCTTGCCCAATCTCGGACGAACCCTCAGGTCCTGGACACTGGACTGACAGCACAGGACATTCATTACGCCCAGTGCCTCTCGCCTGTCGACTGGGACAAGSCTGACAGCAGTGGCGCCGAGCCGGACGACCTCTTCAACTTCTGA

Related Sequences

bmy_02040T0 Protein

Length: 278 aa      View alignments
>bmy_02040T0
MLFSLKYLGMTLVEQPKGEELSAAAVKRIVATAKASGKKLQKVTLKVSPRGIILTDSITSQLIENVSIYRISYCTADKMHDKVFAYIAQSQHNENLECHAFLCTKRKMAQAVTLTVAQAFKVAFEFWQGWSAGVGGPNTLCLGPTEKEKREKTSQDGGDILGGGCRDSTPSLKSLVATGNLLDLEETAKAPLSTVSANTTHMDEALRPQALNSSNVVWELDDGLDEAFSRLAQSRTNPQVLDTGLTAQDIHYAQCLSPVDWDKXDSSGAEPDDLFNF*