Sequence detailsbmy_02043 (Coding sequence)

Part of scaffold_49 (SequenceType object (1))

For more information consult the page for scaffold_49 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMEM50AENSTTRG00000003542 (Bottlenosed dolphin)

Gene Details

transmembrane protein 50A

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003320, Bottlenosed dolphin)

Protein Percentage 88.57%
cDNA percentage 92.62%
Ka/Ks Ratio 0.79429 (Ka = 0.0747, Ks = 0.0941)

TMEM50AENSBTAG00000001296 (Cow)

Gene Details

transmembrane protein 50A

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000001706, Cow)

Protein Percentage 86.43%
cDNA percentage 88.1%
Ka/Ks Ratio 0.25206 (Ka = 0.0808, Ks = 0.3207)

Additional orthologs identified in other species via the OPTIC pipeline.

TMEM50A (Human)   Tmem50a (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 636 bp    Location:1960859..1939249   Strand:-
Raw sequence 
>bmy_02043
CAGCGAGTGCTACTCTCTCCCCGCGCCGCTCCCTCCGCCCCGTCTCCGCATGCGCGACCGAGCTCCTGGGGCGGTGCTGCTCAATCCGGGTATCCGGCGGCCTGTAGCTGTTTTGTTTTCTTGGCTGGAACTGGGAAAGTGAGGCGGCCYGGCGCGGCGCGACACCGGGCTCTGGACCGACTGCACGCGCGGGGCTGGACTGACCTGAAAAAAATGTCTGGATTTCTAGAAGGCTTGAGATGCTCAGAATGCATTGATTGGGGGGAAAAGCGCAATACTATTGCTTCCGTTGCTGCTGGTATCCTATTTTTTACAGGCTGGTGGATTATCATAGATGCAGCTGTCATTTATCCCAGCATGGAAGAGTTCAACCACTCCTACCATGCCTGTGGTGTTATAGCAACCATAGCCTTCCTAATGATTAATGCAGTATCGAATGGACAAGTGCGAGGTGATAGTTACAGTGAAGGTTGCCTGGGTCAAACAGGTGCTCGCATTTGGCTGTTCATTGGTTTCATGTTGGCCTTTGGCTCTCTGATCGCATCTATGTGGATTCTTTTTGGAGGGTATGTTGCTAAAGAGGACTCGTTTTTAAGTTTGGCCGCACTGAAGACTTGTGGCAGTGAAAACATCTGA

Related Sequences

bmy_02043T0 SequenceType object (3)

Length: 212 aa      View alignments
>bmy_02043T0
QRVLLSPRAAPSAPSPHARPSSWGGAAQSGYPAACSCFVFLAGTGKVRRPGAARHRALDRLHARGWTDLKKMSGFLEGLRCSECIDWGEKRNTIASVAAGILFFTGWWIIIDAAVIYPSMEEFNHSYHACGVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFIGFMLAFGSLIASMWILFGGYVAKEDSFLSLAALKTCGSENI*