Part of scaffold_49 (Scaffold)

For more information consult the page for scaffold_49 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RUNX3 ENSBTAG00000019800 (Cow)

Gene Details

runt-related transcription factor 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026378, Cow)

Protein Percentage 91.35%
cDNA percentage 91.67%
Ka/Ks Ratio 0.0321 (Ka = 0.0373, Ks = 1.1614)

RUNX3  (Minke Whale)

Gene Details

runt-related transcription factor 3

External Links

Gene match (Identifier: BACU007593, Minke Whale)

Protein Percentage 99.52%
cDNA percentage 99.68%
Ka/Ks Ratio 0.11147 (Ka = 0.0018, Ks = 0.0161)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 630 bp    Location:2308002..2313484   Strand:+
>bmy_02048
ATGCGGGTGACGCCGAGCACGCCCAGCCCCCGAGGCTCGCTCAGCACCACCAGCCACTTCAGCAGCCAGGCCCAGACCCCCATCCAAGGCGCCTCCGACCTGAACCCTTTCTCCGACCCCCGCCAGTTTGACCGCTCCTTCGCAGCGCTGCCGACCCTCCCGGAGAGCCGCTTCCCCGACCCCCGGATGCATTACCCAGGGGCCATGTCGGCCGCCTTCCCCTACAGCGCCACCCCCTCGGGCACGAGCATCAGCAGCCTCGGCGTGGCCAGCATGCCGGCCACCGGCCGCTTCCACCACACCTACCTCCCACCGCCCTACCCGGGGGCCCCGCAGAACCAGAGCGGGCCCTTCCAGGCCAACCCTTCCCCCTACCACCTCTACTACGGCGCTTCCTCCGGCTCTTACCAGTTCTCCATGGTGGCCGGCAGCAGCAGCGCTGGCGACCGCTCGCCCACCCGCATGCTGGCCTCCTGCCCCAGCAGCGCCGCCTCTGTCGCCACCGGCAACCTCATGAACCCCAGCCTGGGTGGCCAGAGCGACGGCGTGGAGGCCGATGGCAGTCACAGCAACTCGCCTACCGCCCTGAGCACGCCCGGCCGCATGGACGAGGCCGTGTGGCGGCCCTAC

Related Sequences

bmy_02048T0 Protein

Length: 210 aa     
>bmy_02048T0
MRVTPSTPSPRGSLSTTSHFSSQAQTPIQGASDLNPFSDPRQFDRSFAALPTLPESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLGVASMPATGRFHHTYLPPPYPGAPQNQSGPFQANPSPYHLYYGASSGSYQFSMVAGSSSAGDRSPTRMLASCPSSAASVATGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGRMDEAVWRPY