Sequence detailsbmy_02067 (Coding sequence)

Part of scaffold_51 (SequenceType object (1))

For more information consult the page for scaffold_51 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LGI2ENSTTRG00000001895 (Bottlenosed dolphin)

Gene Details

leucine-rich repeat LGI family, member 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001777, Bottlenosed dolphin)

Protein Percentage 95.39%
cDNA percentage 94.92%
Ka/Ks Ratio 0.05099 (Ka = 0.0027, Ks = 0.0523)

LGI2ENSBTAG00000017390 (Cow)

Gene Details

leucine-rich repeat LGI family member 2 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000023124, Cow)

Protein Percentage 98.35%
cDNA percentage 94.8%
Ka/Ks Ratio 0.04045 (Ka = 0.009, Ks = 0.2215)

LGI2 (Minke Whale)

Gene Details

leucine-rich repeat LGI family, member 2

External Links

Gene match (Identifier: BACU002248, Minke Whale)

Protein Percentage 99.57%
cDNA percentage 99.07%
Ka/Ks Ratio 0.06456 (Ka = 0.0019, Ks = 0.0299)

Additional orthologs identified in other species via the OPTIC pipeline.

LGI2 (Human)   Lgi2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1638 bp    Location:1227349..1253838   Strand:+
Raw sequence 
>bmy_02067
ATGGCACTGCGGCGGGGCGGCGGCGGGGCGCCGGGACGGCTGCTGTTGCTGCTGGGAGCCGCGTGCCTGATCCCGCCGAGCGCGCAGGTGAGGCGGCTGGCGCGCTGCCCCGCCACTTGCAGCTGTACCAAGGAGTCCATCATCTGCGTGGGCTCCTCCTGGGTGCCCAGGATCGTGCCGGGCGACATCAGCTCCCTGAGCCTGGTAAATGGAACGTTCTCGGAAATCAAGGACCGAATGTTTTCTCATCTGCCTTCCCTGCAGCTGCTATTGCTGAATTCTAACTCATTCACAGTCATCCGGGACGATGCTTTTGCTGGACTTTTTCATCTTGAATACCTGTTCATTGAAGGGAACAAAATAGAAACCATTTCAAGAAACGCCTTCCGTGGCCTTCGTGACCTGACTCACCTTTCTTTGGCCAATAATCACATAAAAGCACTCCCAAGGGATGTCTTCAGTGATTTAGACTCTCTGATTGAACTAGATTTAAGGGGCAATAAGTTTGAATGTGACTGCAAAGCCAAGTGGTTGTATCTGTGGTTGAAGATGACAAATTCCACTGTTTCTGATGTCCTGTGTATCGGTCCACCAGAATATCAGGAAAAGAAGCTGAATGACGTGACCAGCTTTGACTACGAGTGCACAACTACAGATTTTGTTGTTCATCAGACTCTGCCCTACCAGTCGGTCTCAGTGGATACGTTCAACTCCAAGAATGATGTGTACGTGGCCATCGCTCAGCCCAGCATGGAGAACTGCATGGTGCTGGAGTGGGACCACATCGAAATGAATTTCCGGAGCTATGACAATATTACAGGTCAGTCCATCGTGGGCTGTAAGGCCATCCTCATCGACGACCAGGTCTTTGTGGTGGTGGCCCAGCTCTTCGGCGGCTCTCACATTTACAGATACGACGAGAGCTGGACCAAGTTTGTCAAATTCCAGGACATAGAAGTCTCTCGCATTTCCAAGCCCAACGACATCGAGCTGTTTCAGATCGAGGACGAGAAGTTCTTTGTCATCGCAGACAGCTCCAAAGCCGGTCTGTCGACCGTGTATAAATGGAACAGCAAAGGATTCTACTCGTACCAGTCTCTGCACGAGTGGTTCAGGGACACGGACGCCGAGTTTGTTGAAATAGACGGCAAATCACACCTGATCCTATCCAGCCGCTCCCAGGTCCCCATCATCCTCCAGTGGAATAAAAGCTCTAAGAAGTTTGTCCCCCACAGCGACATCCCCAACATGGAGGATGTGCTGGCCGTGAAGAGCTTCAGGATGCAGAACGCCCTCTACCTTTCCCTCACCCGCTTCATCGGGGACTCTAGGGTCATGCGGTGGAATAGCAAGCAGTTTGTGGAGATCCAGGCTCTCCCATCCCGGGGGGCCATGACCCTGCARCCCTTTTCTTTTAAAGAGAATCACTACCTGGCCCTGGGGAGTGACTATACGTTCTCCCAGATATACCAGTGGGATAAAGAGAAGCAGCTCTTCAAAAAATTCAAGGAGATTTATGTGCAGGCGCCTCGTTCCTTCACAGCCGTCTCCACTGACAGGAGAGATTTCTTCTTTGCATCCAGTTTCAAAGGGAAAACAAAGATTTTTGAACACATAGTTGTTGACTTAAGTTTGTGA

Related Sequences

bmy_02067T0 SequenceType object (3)

Length: 546 aa      View alignments
>bmy_02067T0
MALRRGGGGAPGRLLLLLGAACLIPPSAQVRRLARCPATCSCTKESIICVGSSWVPRIVPGDISSLSLVNGTFSEIKDRMFSHLPSLQLLLLNSNSFTVIRDDAFAGLFHLEYLFIEGNKIETISRNAFRGLRDLTHLSLANNHIKALPRDVFSDLDSLIELDLRGNKFECDCKAKWLYLWLKMTNSTVSDVLCIGPPEYQEKKLNDVTSFDYECTTTDFVVHQTLPYQSVSVDTFNSKNDVYVAIAQPSMENCMVLEWDHIEMNFRSYDNITGQSIVGCKAILIDDQVFVVVAQLFGGSHIYRYDESWTKFVKFQDIEVSRISKPNDIELFQIEDEKFFVIADSSKAGLSTVYKWNSKGFYSYQSLHEWFRDTDAEFVEIDGKSHLILSSRSQVPIILQWNKSSKKFVPHSDIPNMEDVLAVKSFRMQNALYLSLTRFIGDSRVMRWNSKQFVEIQALPSRGAMTLQPFSFKENHYLALGSDYTFSQIYQWDKEKQLFKKFKEIYVQAPRSFTAVSTDRRDFFFASSFKGKTKIFEHIVVDLSL*