Part of scaffold_53 (Scaffold)

For more information consult the page for scaffold_53 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

COL9A2 ENSTTRG00000005920 (Bottlenosed dolphin)

Gene Details

collagen, type IX, alpha 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005609, Bottlenosed dolphin)

Protein Percentage 86.62%
cDNA percentage 90.28%
Ka/Ks Ratio 1.04517 (Ka = 0.108, Ks = 0.1033)

BT.4235 ENSBTAG00000020622 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027483, Cow)

Protein Percentage 88.6%
cDNA percentage 89.31%
Ka/Ks Ratio 0.5131 (Ka = 0.0887, Ks = 0.1728)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1857 bp    Location:204..13871   Strand:+
>bmy_02079
ATGCAGTGCCCCCTGTTGCCAGTAGGCGGCGCCGGCCTGCACCACAAGGAGACCGTTTGTTCTACAAAAACCTCAAACCAGCCCCGAGATGCAGAGCCCGTTATAGCCGCCGGCGGACAAGGAGCTGCTGTTCGGTCTGCCCGCCACAGCTCACAGCGAGGTGACAAGGGGCCCCCTGGGAAAGCTGGCCCTCCGGGACCTAAGGGAGAGCCTGGCAAAGCGGGGCCAGATGGGCCAGACGGCAAGCCCGGGATTGATGGCCAGCCTGGGCTCCCAGGTCCCCCCGGCCTGCCGGGCCCTGGCTTCGCCGGACCTCCTGGACCACCTGGACCTGTTGGCCTCCCTGGTGAGATGGGAATCACGGGCCCCAAGGGGGATCCTGGACCAGAGGGACCAGCAGGGCCCCCGGGGCCCCCTGGGAAACCGGGCCGCCCAGGAACCATTCAGGGTCTGGAAGGCAGCGCGGACTTCCTGTGTCCAACCAACTGTCCAGCGGGCGTGAAAGGGCCCCCGGGGCTGCAGGGAGTGAAGGGGCATCCTGGCAAGCGCGGGCTTCTGGGAGATTCCGGCCGCCAGGGGAAGCCGGGTCCCAAGGGAGATGTGGGTGCCTCTGGAGAGCAAGGCATCCCTGGACCACCGGGTCCCCAGGGCGTCAGGGGCTACCCGGGCATGGCGGGACCCAAAGGAGAGACGGGTCCTCACGGGTACAAAGGCATGGTGGGCTCCATCGGCGCCGCCGGGTCACCAGGTGAGGAAGGTCCTCCGGGGCCACCAGGCCGAGCTGGGGAGAAGGGTGACGTGGGCAGCCAAGGTATCCGAGGACCCCAGGGAATAACAGGCCCGAAGGGAGCAACCGGCCCACCAGGCATTGACGGCAAGGACGGGACCCCAGGCACACCTGGCATGAAGGGCAGTGCAGGACAGGTGGGGCGGCCAGGAAACCCGGGCCACCAGGGCCTAGTGGGTGTGCCCGGCCAGCCTGGGACAAAAGGAGGCCCTGGAGACAAGGGTGAGCCAGGCCGGCAAGGCTTCCCAGGAGTCTCTGGTTCCCCCGGGAAGGAGGGTGACCACGGTGAGAGGGGGCCAGTGGGGCAGCCAGGCCCTCAAGGCCTACAGGGCCCCAAGGGGGAACAGGGTCCCCCCGGAATTCCAGGGCCCCAAGGCTTGCCAGGAATCAAGGGAGACAAGCAAGGAGTCCGCGGAGAAGCCGGCTATCCGGGCCCCAGCGGGGATGCAGGCGCCCCGGGGGTGCAGGGCTACCCCGGGCCCCCGGGCCCTCGAGGACTGGCTGGAAACCGAGGCTTGCCCGGACAGCCCGGGAGGCAGGGCGTGGCGGGCCGAGATGCTAGTGACCAGCACATCGAGGATGTGGTGCTGAAGATGCTGCAAGAGCAACTGGCAGAGATGGCTGTGAGTGCCAAGCGGGAGGCTCTGGGTGCGACTGGGATGATGGGTCTCCCAGGACCCCCTGGGCCTCCTGGGTACCCAGGCAAACAGGGACCCATTGGGCACCCTGGCCCTCGGGGCATTCCTGGCATCGTGGGAGCCGTGGGTCAGATTGGCAACACCGGGCCCAAGGGAAAATGTGGAGAGAAGGGTGATAGGGGAGAAGTTGGACGAGGGCATCCCGGGATGCCTGGGCCCCCAGGGATCCCAGGACTGCCTGGCCGGCCTGGCCAGGCAATCAACGGCAAAGATGGAGATCGAGGAGTCCCAGGGGCCCCAGGAGAGGCAGGCCGACCTGGCCTGCCAGGCCCCATGGGGCTGCCAGGCTTCTGTGAGCCTGCGGCCTGCCTTGGAGCCTCAGCCTACACATCTGCACGCCTCACAGAGCCTGGATCCATCAAGGGGCCATGA

Related Sequences

bmy_02079T0 Protein

Length: 619 aa      View alignments
>bmy_02079T0
MQCPLLPVGGAGLHHKETVCSTKTSNQPRDAEPVIAAGGQGAAVRSARHSSQRGDKGPPGKAGPPGPKGEPGKAGPDGPDGKPGIDGQPGLPGPPGLPGPGFAGPPGPPGPVGLPGEMGITGPKGDPGPEGPAGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPAGVKGPPGLQGVKGHPGKRGLLGDSGRQGKPGPKGDVGASGEQGIPGPPGPQGVRGYPGMAGPKGETGPHGYKGMVGSIGAAGSPGEEGPPGPPGRAGEKGDVGSQGIRGPQGITGPKGATGPPGIDGKDGTPGTPGMKGSAGQVGRPGNPGHQGLVGVPGQPGTKGGPGDKGEPGRQGFPGVSGSPGKEGDHGERGPVGQPGPQGLQGPKGEQGPPGIPGPQGLPGIKGDKQGVRGEAGYPGPSGDAGAPGVQGYPGPPGPRGLAGNRGLPGQPGRQGVAGRDASDQHIEDVVLKMLQEQLAEMAVSAKREALGATGMMGLPGPPGPPGYPGKQGPIGHPGPRGIPGIVGAVGQIGNTGPKGKCGEKGDRGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGVPGAPGEAGRPGLPGPMGLPGFCEPAACLGASAYTSARLTEPGSIKGP*