Sequence detailsbmy_02082 (Coding sequence)

Part of scaffold_53 (SequenceType object (1))

For more information consult the page for scaffold_53 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RLFENSTTRG00000005870 (Bottlenosed dolphin)

Gene Details

rearranged L-myc fusion

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005555, Bottlenosed dolphin)

Protein Percentage 98.69%
cDNA percentage 98.71%
Ka/Ks Ratio 0.1415 (Ka = 0.0051, Ks = 0.0358)

RLFENSBTAG00000019695 (Cow)

Gene Details

zinc finger protein Rlf

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000026252, Cow)

Protein Percentage 96.78%
cDNA percentage 95.73%
Ka/Ks Ratio 0.10595 (Ka = 0.0146, Ks = 0.1373)

RLF (Minke Whale)

Gene Details

rearranged L-myc fusion

External Links

Gene match (Identifier: BACU000400, Minke Whale)

Protein Percentage 99.28%
cDNA percentage 99.23%
Ka/Ks Ratio 0.17432 (Ka = 0.0027, Ks = 0.0156)

Additional orthologs identified in other species via the OPTIC pipeline.

RLF (Human)   Rlf (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 4572 bp    Location:106697..91382   Strand:-
Raw sequence 
>bmy_02082
ATGAAGGCATCAGTTTGTAAAACAATTGCTTGTCTTTTACCAGAAGATTTAGAAGTCAGACGAGCCTGTCAGCTTACAGAATTCTTAATTGAACCCAGTTTGGATGGATTTAATATGTTGGAAGAACTGTATTCCCAACCAGATCAAAAATTTGATGAAGAAAATGCACCAGTTCCGAATTCTCTCCGATGTGAGCTTTTACTAGCTTTAAAAGCCCACTGGCCTTTTGATCCTGAATTTTGGGACTGGAAAACTTTAAAACGACACTGCCACCAACTTCTAGGACAAGAAGCCTCAGATTCTGATGATGACCTAAGTGGCTATGAATTGTCTATTAATGACACAGATGTTTTAGAGTCATTTCTTAGTGATTATGAGGAAAGTAAAGAAGATAAACAATAYAGAAGAAGAGATTTGACAGATCAGCATAAGGAGAAAAGAGACAAAAAACCCATTGGTTCTTCTGAAAGATACCAGAGATGGCTTCAGTATAAATTTTTCTGTTTGTTATGTAAGCGGGAATGTATAGAGGCCAGGATTCTTCATCATTCTAAGATGCATATGGAAGATGGAATTTACACCTGTCCGGTTTGTATTAAAAAATTCAAGAGAAAAGAAATATTTGTTCCTCATGTGATGGAACATGTTAAAATGCCACCAAGCAGAAGGGATCGCTCTAGAAAGAAATTACTGTTGAAAGGCTCTCAAAAGGGAGTTTGTCCCAAGAGCCCTTCTGCAGCCCTGGAGCAAGGTCAGTCATTGAATGAACAAGCCAAAGGAGAGTCACATGAATATGTCACATTCAGCAAATTAGAAGATTGCCACCTGCAAGACAGAGATTTGTACCCATGTCCTGGCACAGACTGTTCCCGTGTGTTTAAGCAGTTTAAATACTTAAGTGTGCATCTTAAAGCTGAACACCAAAATAATGATGAAAATGCCAAGCACTACTTAGATATGAAAAATAGAAGAGAGAAGTGTACTTACTGTCGACGACATTTCATGTCTGCTTTTCACCTGCGAGAGCATGAACAAGTGCATTGTGGTCCTCAGCCTTATATGTGTGTATCTATAGATTGCTATGCTAGGTTTGGATCAGTGAATGAACTGCTTAACCATAAACAAAAACATGATGATCTGCGTTATAAATGTGAATTAAATGGCTGTAATATTGTTTTCAGTGACTTGGGACAGCTTTACCACCATGAAGCACAACACTTTAGGGATGCATCCTACACATGCAACTTCGTTGGCTGTAAAAAGTTCTATTATTCCAAAATTGAATACCAGAATCACCTCTCAATGCATAATGTTGAAAGTTCAAATGGAGCTGTGAAGAAATCAGTGAAACTTGAGCCTGCAGCAGGGGAAAAGCAAGATTGTATTGATCAGCCCCATCTACTTGACCAAGCTGATAAATCACATTTACCAGAGGATCTTCTTTTCTGTGCAGGATCAGCTAGTTCTCAAATAGAAACTGCAGAAAATCTGAAAGAAAACAGTGACAGTAATTCTAGTGATCAGTTAAGTCATAGCTCTTCAGCTTCCATGAATGAAGAGTTAATTGACACACTGGATCACTCTGAAACCATGCAGGATATATTATTGTCTCACGAGAAAGTCTTTGTGCCCTCCGGTTTAAAAGAAAAATGTTCCAATGTGGCAGTTTGTTTTGATGGGACTAAGTTTACCTGTGGTTTTGATGGCTGTGGTTCCACGTACAAAAACGCAAGAGGCATGCAGAAGCATCTAAGGAAGGTTCATCCATACCATTTCAAACCCAAAAAGGTAAAGACAAAAGATCTCTTTCCCTGTTTGGGTAATGAACATAATCCAACAACTGAAAAGTTTGATACAGAACCTAAACCTAGCTCAGATACAAACAGTGACTCCCCAGATGAAGGTCTAGATCACAATATTCATACTAAATGTAAACGAGAACATCAGGGTTATTCCTCAGAAGCCTCCATTTGTGCTTCTAAAAGGCCGTGTACAGAGGATACCATGTTGGAACTTCTGTTACGCTTGAAGCATTTAAGCTTGAAAAACTCAATAACACATGGATCTTTCTCAGGGTCATTGCAGGGGTACCCATCCAGTGGTGCTAAGTCTCTTCAAGTGGTGTCACCTACAATCTCAGACCTTAATTTTCAGAATCAAGATGAAAATATGCCAAGTCAGTACCTGGCACAGCTGGCAGCCAAGCCTTTTTTCTGTGAGCTTCAAGGATGCAAATATGAATTTGTGACCAGAGAGGCTTTGTTAATGCATTATCTTAAAAAACATAATTATTCAAAAGAAAAGGTCCTTCAGCTAACCATGTTTCAACATCGGTATTCCCCGTTCCAGTGTCATATCTGCCAAAGGTCATTTACGAGAAAAACACACCTTAGGATTCATTATAAAAATAAACATCAAATTGGCAGTGACAGAGTAACTCAAAAACTATTAGATAATGAAAAATGTGATCATGAAGGCCCATGCTCAGTAGACAGGTTGAAAGGTGATTGTTCCGTGGAACTTGGAGGTGATCCCAACAGTAACTCTCAGAAGCCACACTGTCATTCTAAAAAGGATGAATGCAGTTCAGAAACAGATTTGGAGTCATCCTGCGAAGAAACAGAAAGTAAAACATCTGATATTTCMTCACCAATAGGTAGCCATAGAGAAGAAGGAGAAGGAAGAGAGGGGAGAGGTAGCAGGAGAACTGTTGCTAAAGGAAATCTCTGCTATATTTTGAATAAATACCACAAACCATTCCATTGTATCCATAAAACTTGCAACTCCTCATTCACCAATCTAAAAGGCTTGATTCGCCATTACAGGACTGTACATCAATACAACAAAGAACAGTTATGTTTAGAGAAAGACAAAGCGAGAACCAAAAGGGAACTTGTCAAATGCAAAAAGATATTTGCTTGCAAATATAAGGAATGTAACAAACGTTTCCTGTGTTCCAAAGCTCTTGCTAAGCACTGTAGTGACTCTCATAACCTAGACCACATTGAAGAGCCGAAAGTGCTTTCTGAAGCTGAGTCRGTGGCCAGGTTTTCCTGTAACCAGCCTCAGTGCCCTGCTGTTTTTTACACATTCAGCAAGTTGAAGCACCACTTGATGGAACAGCATAATATTGAAGGAGAAATACATTCAGATTATGAAATTCATTGTGATCTTAATGGCTGTGGCCAGATTTTCACCCATCGCAGTAATTATTCTCAACATGTATATTATCGACATAAGGACTATTATGATGATCTGTTTAGAAGCCAGAAAGTGGCAAATGAAAGGCTACTAAGGAGTGAAAAGGTGTGTCAAACAACTCACACTSAGGGGCATGAACATCAGACTACCAGGAGATCGTTTAATGCTAAGGCTAAAAAATGTGGCTTAATCAAAGAAAAGAAAGCTCCGATTAGTTTTAAAACAAGAGCTGAAGCCCTCCATATGTGTGTGGAGCATTCTGAGCACACGCAGTACCCTTGCATGGTTCAAGGATGCTTATCTGTGGTGAAGTTGGAGAGCAGCATAGTGAGGCATTACAAACGTACCCATCAGATGAGTAGTGCCTACTTAGAGCAACAGATGGAAAATCTTGTCGTTTGTGTTAAGTACGGTACCAAAATTAAGGAGGAGCCCCCTTCTGAAGCAGAGCCCTGTATAAAGAAAGAAGAAGATAGAAGCTGTGAATCAGAGYTCACAAAGCACAGCCATTCCCCAGGTGACAGTAGCATACCTGTCCAGACCGCYGATTCCCTTTATCCRGGTGAAAGGGATGGAGGTCAGAAAGGATGTACAGAAAGCAACCCAGTTTTTGATGCAGATACTCTGCTCTACAGAGGAACTTTGAAATGTAACCATAGTCCAGAAACCACTTCTTTGGAACAGTGTAATACAGTTCAGCCTCCTCCTTGTAAAATAGAAAATTCCATTCCTAATCCTGATGGGACTGAAAGTGGGACTTATTTCACAAGTTTCCAGCTGCCTTTACCAAGGATCAAAGACTCAGAAACCGGGCAGCAAAGTTCAGGGCAAGAAAACACTGTAAAAAATTCAACCCATGTCCCAAAAGAGAATTTTAGGAAGCATCCACATCCCAGGTCATTTGATTTGAAGACTTACAAACCTATGGGATTTGAATCTTCATTTCTGAAATTTATTCAGGAAAGTGAAGAGAAAGAAGATGATTTTGATGATTGGGAGCCTTCAGAGCACTTACCATTAAGTAATTCTTCACAACCCAGTAATGACTTAACAGGGAGTGTTATGGCAAATAATATGGTGAATGACAATGACCCTGAAGTTGACATACCTCATTCTTCCAGTGACTCTGCAATTCATGAGAACCTGACTGCAATCCCACCTTTAATAGTAGCTGAGACGACAGCAGTTCCTCCCTTGGAAAACCTGAGGGTTGTATTGGACAAAGCATTAACAGACTGTGGAGAACTTGCCTTAAAACAGCTTCATTATCTTCGGCCAGTGGTTGTCCTTGAAAGATCTAAGTTTTCCACACCAATTTTAGAGTTGTTTCCAACAAAAAAGACAGATGAGCTTTGTGTAGGAAGTTCCTAA

Related Sequences

bmy_02082T0 SequenceType object (3)

Length: 1524 aa      View alignments
>bmy_02082T0
MKASVCKTIACLLPEDLEVRRACQLTEFLIEPSLDGFNMLEELYSQPDQKFDEENAPVPNSLRCELLLALKAHWPFDPEFWDWKTLKRHCHQLLGQEASDSDDDLSGYELSINDTDVLESFLSDYEESKEDKQYRRRDLTDQHKEKRDKKPIGSSERYQRWLQYKFFCLLCKRECIEARILHHSKMHMEDGIYTCPVCIKKFKRKEIFVPHVMEHVKMPPSRRDRSRKKLLLKGSQKGVCPKSPSAALEQGQSLNEQAKGESHEYVTFSKLEDCHLQDRDLYPCPGTDCSRVFKQFKYLSVHLKAEHQNNDENAKHYLDMKNRREKCTYCRRHFMSAFHLREHEQVHCGPQPYMCVSIDCYARFGSVNELLNHKQKHDDLRYKCELNGCNIVFSDLGQLYHHEAQHFRDASYTCNFVGCKKFYYSKIEYQNHLSMHNVESSNGAVKKSVKLEPAAGEKQDCIDQPHLLDQADKSHLPEDLLFCAGSASSQIETAENLKENSDSNSSDQLSHSSSASMNEELIDTLDHSETMQDILLSHEKVFVPSGLKEKCSNVAVCFDGTKFTCGFDGCGSTYKNARGMQKHLRKVHPYHFKPKKVKTKDLFPCLGNEHNPTTEKFDTEPKPSSDTNSDSPDEGLDHNIHTKCKREHQGYSSEASICASKRPCTEDTMLELLLRLKHLSLKNSITHGSFSGSLQGYPSSGAKSLQVVSPTISDLNFQNQDENMPSQYLAQLAAKPFFCELQGCKYEFVTREALLMHYLKKHNYSKEKVLQLTMFQHRYSPFQCHICQRSFTRKTHLRIHYKNKHQIGSDRVTQKLLDNEKCDHEGPCSVDRLKGDCSVELGGDPNSNSQKPHCHSKKDECSSETDLESSCEETESKTSDISSPIGSHREEGEGREGRGSRRTVAKGNLCYILNKYHKPFHCIHKTCNSSFTNLKGLIRHYRTVHQYNKEQLCLEKDKARTKRELVKCKKIFACKYKECNKRFLCSKALAKHCSDSHNLDHIEEPKVLSEAESVARFSCNQPQCPAVFYTFSKLKHHLMEQHNIEGEIHSDYEIHCDLNGCGQIFTHRSNYSQHVYYRHKDYYDDLFRSQKVANERLLRSEKVCQTTHTZGHEHQTTRRSFNAKAKKCGLIKEKKAPISFKTRAEALHMCVEHSEHTQYPCMVQGCLSVVKLESSIVRHYKRTHQMSSAYLEQQMENLVVCVKYGTKIKEEPPSEAEPCIKKEEDRSCESEXTKHSHSPGDSSIPVQTADSLYPGERDGGQKGCTESNPVFDADTLLYRGTLKCNHSPETTSLEQCNTVQPPPCKIENSIPNPDGTESGTYFTSFQLPLPRIKDSETGQQSSGQENTVKNSTHVPKENFRKHPHPRSFDLKTYKPMGFESSFLKFIQESEEKEDDFDDWEPSEHLPLSNSSQPSNDLTGSVMANNMVNDNDPEVDIPHSSSDSAIHENLTAIPPLIVAETTAVPPLENLRVVLDKALTDCGELALKQLHYLRPVVVLERSKFSTPILELFPTKKTDELCVGSS*