Sequence details bmy_02089 (Coding sequence)

Part of scaffold_53 (Scaffold)

For more information consult the page for scaffold_53 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIT1 ENSTTRG00000005064 (Bottlenosed dolphin)

Gene Details

tRNA isopentenyltransferase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004778, Bottlenosed dolphin)

Protein Percentage 94.42%
cDNA percentage 95.97%
Ka/Ks Ratio 0.47342 (Ka = 0.0316, Ks = 0.0667)

TRIT1 ENSBTAG00000013832 (Cow)

Gene Details

tRNA dimethylallyltransferase, mitochondrial

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018380, Cow)

Protein Percentage 90.93%
cDNA percentage 91.55%
Ka/Ks Ratio 0.24711 (Ka = 0.0507, Ks = 0.2051)

TRIT1  (Minke Whale)

Gene Details

tRNA isopentenyltransferase 1

External Links

Gene match (Identifier: BACU000406, Minke Whale)

Protein Percentage 95.12%
cDNA percentage 96.9%
Ka/Ks Ratio 0.76987 (Ka = 0.029, Ks = 0.0377)

Additional orthologs identified in other species via the OPTIC pipeline.

TRIT1 (Human)   Trit1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1314 bp    Location:367189..410006   Strand:+
Raw sequence 
>bmy_02089
ATGGCGGCGGTGGCGGCTGCACGAGCTGTGTCTGCGGGCCCTGGGCTCCGGGGCCTAAAACGGACACTGCCTCTTGTAGTAATTCTCGGGGCCACGGGCACCGGCAAATCCACGCTGGCGTTACAGCTAGGCCAGCGGCTCGGTGGCGAGATCGTCAGCGCTGACTCCATGCAGGTCCCTGGGTTTAGATCCGTTGTTTATGAAGGCCTAGACATCATCACCAACAAGGTTTCTGCCCAAGAGCAGAGAATGTGCCAGCACCACATGATCGGCTTTGTGGATCCTCTTGTGACAAATTACACAGTGACTGGCTGGCAAGGGGAAGAAGTGTATATATTTGCCCGAGATAAAATTCCTATTGTCGTGGGAGGAACCAATTATTACATTGAGTCTCTGCTCTGGAAAGTGCTTGTCAATGCTAAGCCCTGGGAGATGGGCACTGAGAAAGTGATTGACCAGAAAGTTGAGCTTGAAAAGGAGGATGGCCATGCACTCCACAAACGCCTAAGCCAGGTGGACCCAGAAATGGCTGCCAAGCTGCACCCACATGACAAGCGCAAAGTGGCCAGGAGCTTGCAAGTGTTTGAAGAAACAGGAATCTCTCATAGTGAATTTCTTCATCGTCAACATGCAGAGGAAGGTGGTGGTCCCCTTGGAGGCCCTCTGAAGTTCCCTAACCCATGCATCCTCTGGCTTCATGCTGAACAGACAGTTCTAGATGAGCGCTTGGATAAGAGGGTGGATAACATGCTCGCCGCTGGGCTCTTGGATGAACTAAGAGATTTTCACAAACGCTATAATGAGAAGAAAGTTGTGGAAAACAGCAAAGTGAGAAGTGGTATTGAGGCTCTGAAACAAGTGACTAAGAGATATGCCCGGAAGCAAAACCGATGGATTAAAAACCGTTTTTTGAGCAGACCTGGGCCCAGTGTTCCCCCAGTATATGGCTTAGAAGCATCCGATGTCTCCAAGTGGGAGGAGTCTGTTCTTGAACCTGCTCTTGAAATTGTGCGAAGTCTCATCCAGGGCCACAAGCCTGCAGCCACTCCAGTAAAGATGCCAAGCAGTGAAACTRAGAACAAGAGAAGTTATCACATGTGTGACCTCTGTGATCGAATCATCATTGGGGACCGCGAATGGGCAGCACACATGAAGTCCAAGTCCCACTTGCACCAACTGAAGAAAAGAAGAAGGTTGGACTCAGATGCCATCACTACCATAGAGAGTCAGAGTATTTCCCCAGACCATGATAAAGAGCTTAAAGAAAAGGGATCCCTAGGGCAGAATGATGAAGAGCTGAAATCCAGCATTTAA

Related Sequences

bmy_02089T0 Protein

Length: 438 aa      View alignments
>bmy_02089T0
MAAVAAARAVSAGPGLRGLKRTLPLVVILGATGTGKSTLALQLGQRLGGEIVSADSMQVPGFRSVVYEGLDIITNKVSAQEQRMCQHHMIGFVDPLVTNYTVTGWQGEEVYIFARDKIPIVVGGTNYYIESLLWKVLVNAKPWEMGTEKVIDQKVELEKEDGHALHKRLSQVDPEMAAKLHPHDKRKVARSLQVFEETGISHSEFLHRQHAEEGGGPLGGPLKFPNPCILWLHAEQTVLDERLDKRVDNMLAAGLLDELRDFHKRYNEKKVVENSKVRSGIEALKQVTKRYARKQNRWIKNRFLSRPGPSVPPVYGLEASDVSKWEESVLEPALEIVRSLIQGHKPAATPVKMPSSETXNKRSYHMCDLCDRIIIGDREWAAHMKSKSHLHQLKKRRRLDSDAITTIESQSISPDHDKELKEKGSLGQNDEELKSSI*