Part of scaffold_53 (Scaffold)

For more information consult the page for scaffold_53 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PABPC4 ENSTTRG00000014340 (Bottlenosed dolphin)

Gene Details

poly(A) binding protein, cytoplasmic 4 (inducible form)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013598, Bottlenosed dolphin)

Protein Percentage 93.51%
cDNA percentage 92.91%
Ka/Ks Ratio 0.04268 (Ka = 0.0018, Ks = 0.0426)

PABPC4 ENSBTAG00000017125 (Cow)

Gene Details

polyadenylate-binding protein 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022761, Cow)

Protein Percentage 99.07%
cDNA percentage 96.22%
Ka/Ks Ratio 0.02188 (Ka = 0.003, Ks = 0.1354)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1983 bp    Location:643111..657732   Strand:+
>bmy_02095
ATGAACGCTGCGGCCAGCAGCTACCCCATGGCCTCCCTGTACGTGGGTGACCTGCACTCGGACGTCACCGAGGCCATGCTGTACGAAAAGTTCAGTCCTGCGGGGCCTGTGCTGTCCATCCGGGTCTGCCGCGACATGATCACCCGCCGCTCCCTGGGTTATGCCTACGTCAACTTTCAGCAGCCGGCTGACGCTGAGCGGGCCTTGGATACCATGAACTTTGATGTGATTAAGGGAAAGCCAATCCGTATCATGTGGTCTCAGAGGGATCCCTCTTTGAGAARWTCTGGCRTGGGAAATGTCTTCATCAAGAACCTGGACAAATCTATAGATAACAAGGCACTTTATGATACTTTTTCTGCTTTTGGAAACATTCTGTCCTGCAAGGTGGTGTGTGATGAGAACGGCTCTAAGGGTTATGCCTTTGTCCACTTCGAGACCCAGGAGGCTGCCGACAAGGCCATCGAGAAGATGAATGGCATGCTCCTCAATGACCGCAAAGTGTTTGTGGGCAGATTCAAGTCTCGAAAAGAGCGGGAAGCTGAGCTTGGAGCCAAAGCTAAGGAATTCACCAATGTTTATATCAAAAACTTTGGGGAAGAGGTGGATGATGAGAGTCTGAAAGAGCTATTCAGCCAGTTTGGTAAGACTCTAAGTGTCAAGGTGATGAGAGATCCCAGTGGGAAATCCAAAGGCTTTGGCTTTGTGAGTTACGAAAAACACGAGGATGCCAATAAGGCCGTGGAGGAGATGAATGGAAAAGAAATCAGCGGGAAAGTCATTTTCGTCGGCCGTGCACAGAAGAAAGTGGAACGGCAGGCCGAGTTAAAGCGAAAATTTGAACAGCTGAAACAGGAGAGAATTAGTCGGTATCAGGGGGTGAACCTCTACATTAAGAACTTGGATGACACCATTGATGATGAGAAGTTAAGGAAAGAGTTTTCTCCTTTTGGATCAATCACCAGTGCTAAGGTGATGCTGGAGGATGGGAGAAGCAAAGGGTTTGGCTTTGTCTGCTTCTCATCCCCTGAAGAGGCAACCAAAGCAGTCACGGAGATGAACGGACGCATCGTGGGCTCCAAGCCACTGTATGTCGCCCTGGCCCAGAGAAAGGAAGAGAGAAAGGCTCACCTGACCAACCAGTATATGCAGCGGGTGGCCGGGATGAGAGCGCTTCCCGCCAATGCCATCTTAAATCAGTTCCAGCCTGCAGCTGGGGGCTACTTTGTGCCAGCAGTTCCACAGGCTCAGGGAAGACCTCCATATTACACACCTAACCAGTTAGCACAGATGAGGCCTAATCCACGCTGGCAGCAAGGTGGGAGACCTCAAGGCTTCCAAGGAATGCCAAGTGCTATACGCCAGTCTGGGCCTCGTCCAGCTCTTCGCCATCTGGCTCCAACTGGTAATGCTCCGGCCTCTCGTGGCCTCCCTACTACCGCTCAGAGAGTCGGGTCTGAGTGCCCGGACCGCTTGGCTATGGACTTTGGTGGGGCTGGTGCCGCCCAGCAAGGGCTGACTGACAGCTGCCAGTCTGGAGGTGTTCCCACAGCTGTGCAGAACCTAGCGCCTCGTGCCGCTGTCGCTGCCGCCGCTCCTCGGGCTGTTGCACCTTACAAATACGCCTCCAGTGTCCGCAGCCCTCACCCCGCCATCCAGCCCCTGCAGGCACCCCAGCCTGCGGTCCACGTGCAGGGGCAGGAGCCGCTGACCGCCTCCATGCTGGCCGCAGCACCCCCCCAGGAACAGAAACAGATGCTGGGTGAACGTTTGTTCCCGCTCATCCAGACGATGCACTCAAACCTGGCTGGGAAGATTACGGGGATGCTGCTGGAGATTGACAACTCGGAGCTGCTGCACATGCTGGAGTCCCCCGAGTCTCTCCGCTCCAAGGTGGATGAAGCTGTGGCGGTCCTACAGGCTCATCATGCCAAGAAAGAAGCTGCCCAGAAGGTGGGCGCTGTTGCTGCTGCTACCTCTTAG

Related Sequences

bmy_02095T0 Protein

Length: 661 aa      View alignments
>bmy_02095T0
MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRXSGXGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPALRHLAPTGNAPASRGLPTTAQRVGSECPDRLAMDFGGAGAAQQGLTDSCQSGGVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVAAATS*