Part of scaffold_53 (Scaffold)

For more information consult the page for scaffold_53 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

YRDC ENSTTRG00000013538 (Bottlenosed dolphin)

Gene Details

yrdC domain containing (E. coli)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012846, Bottlenosed dolphin)

Protein Percentage 96.83%
cDNA percentage 98.15%
Ka/Ks Ratio 0.48316 (Ka = 0.0148, Ks = 0.0306)

YRDC ENSBTAG00000006510 (Cow)

Gene Details

YrdC domain-containing protein, mitochondrial

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008530, Cow)

Protein Percentage 92.91%
cDNA percentage 93.7%
Ka/Ks Ratio 0.18542 (Ka = 0.0331, Ks = 0.1786)

YRDC  (Minke Whale)

Gene Details

yrdC N(6)-threonylcarbamoyltransferase domain containing

External Links

Gene match (Identifier: BACU020084, Minke Whale)

Protein Percentage 99.21%
cDNA percentage 99.47%
Ka/Ks Ratio 0.30497 (Ka = 0.0035, Ks = 0.0114)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 774 bp    Location:2175982..2179044   Strand:+
>bmy_02118
ATGTCTCCGGCGCGTTCGTGCACGGGGCTGAGGGCCGCGGTGGCTGCCAGCGTGGGGTTGAGCGAGGGTCCGGCGGGCTCCGCCCGGAGCGGGCGCCTTCTCCGTCCGCCGAGCCCCGCTCCGGCGGCGCCGGGGGCCCGGCTGTTCCGGCTCCCGGGGAGCGGGGCCGTGCGGGCCGCAAACCCGGAGCGCGCCGGCTGGACCGAGGCGCTGCGGGCCGCCGTGGCCGAGCTGCGCGCCGGCGCCGTGGTGGCCGTCCCCACCGATACGCTGTACGGCCTGGCCTGCTCGGCGAGCTGCTCGGAGGCACTGGGCGTCGTGTACCGCGTCAAGGGCCGCAGCGAGACCAAGCCGCTGGCCGTGTGCCTGGGCCGCGTGGCCGACGTCTACAGGTACTGCCGTGTGAGAGTACCTGAGGGCCTCCTGAATGACCTGCTGCCAGGACCAGTGACCCTGGTGATGGAACGCTCGGAGGAGCTCAACAAGGACCTGAACCCCTTCACTCCTCTTGTAGGCATCCGGATTCCTGACCACGCCTTCATGCAGGACTTGGCCCAGGTGTTTGGGGGACCTCTTGCTCTCACCAGCGCCAACCTCAGCTCCCAGGCCAGCTCTCTGAATGTTGAGGAATTTCAGGACCTCTGGCCTCGCTTGTCCTTGGTCATTGATGGGGGACCAATTGGGGACGGCCAGAGCCCTGAGTGTCGACTAGGCTCAACTGTGGTTGACTTGTCTGTGCCTGGAGAGTTTGGCATCATTCGTCCGGGTTGGTGA

Related Sequences

bmy_02118T0 Protein

Length: 258 aa      View alignments
>bmy_02118T0
MSPARSCTGLRAAVAASVGLSEGPAGSARSGRLLRPPSPAPAAPGARLFRLPGSGAVRAANPERAGWTEALRAAVAELRAGAVVAVPTDTLYGLACSASCSEALGVVYRVKGRSETKPLAVCLGRVADVYRYCRVRVPEGLLNDLLPGPVTLVMERSEELNKDLNPFTPLVGIRIPDHAFMQDLAQVFGGPLALTSANLSSQASSLNVEEFQDLWPRLSLVIDGGPIGDGQSPECRLGSTVVDLSVPGEFGIIRPGW*