Part of scaffold_53 (Scaffold)

For more information consult the page for scaffold_53 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNIP1 ENSTTRG00000008598 (Bottlenosed dolphin)

Gene Details

Smad nuclear interacting protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008150, Bottlenosed dolphin)

Protein Percentage 97.86%
cDNA percentage 97.23%
Ka/Ks Ratio 0.12113 (Ka = 0.0098, Ks = 0.0809)

SNIP1 ENSBTAG00000016852 (Cow)

Gene Details

smad nuclear-interacting protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022416, Cow)

Protein Percentage 96.26%
cDNA percentage 93.58%
Ka/Ks Ratio 0.07074 (Ka = 0.0171, Ks = 0.2411)

SNIP1  (Minke Whale)

Gene Details

Smad nuclear interacting protein 1

External Links

Gene match (Identifier: BACU009684, Minke Whale)

Protein Percentage 99.73%
cDNA percentage 98.48%
Ka/Ks Ratio 0.10851 (Ka = 0.0048, Ks = 0.0445)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1125 bp    Location:2386929..2398812   Strand:+
>bmy_02126
ATGAAGGAGGTGAAGAGCGAGCGGGATCGGGGGAGCCGACGAAGGCACCGGGACGGCGACATGGTGGCGGCGGCGGTGGTGGTGAAGCAGGAGCGCCTCAGCCCGGAATCCGTGCCTCCCGTGCACCGCCGCCCGGACTCCTCCGGCGGTAGCCCGTCCCCACCGGCCGGCGAGTCGGGCCGCCCGAGTCACCGCGGGAACCGAGCCCGAGGAGGTAGCCGGTCTCCAGCCAAAAAGAAAAACAAGTCCTCAGGGAGAAGAAGCAAGTCTCCCCGGAGTAAGAGAAGCCGAAGTCCTCACCACTCAACAGTCAAAGTAAAGCAGGAACACAGGCGAGCTAGGAACAGTGACCGAGACAGACACCGCGGCCATTCCCACCAGAGGAGAAGCTCGGTCGAGAGGCCTGGCAGCGGGCAGCCTCAGGGACGGGATCGAGATGCCCAGAACCTACAGGCGCAGGAATCTGAGCGGGAGTTTCACAATGCCCGGCGCCGGGAGCACCGCCAGAAGAACGAAGCCGGCGGTAATGCATCTCAGGACTCACTTCCTCAGCCTGGCCCTGGCAGCAACAACAAAGACAAAGAAGTGCCTGTTAAAGAAAAGCCAAGCTTTGAACTTTCTGGGGCACTTCTTGAGGACACCAACACCTTTCGGGGTGTAGTCATTAAATACAGCGAGCCCCCRGAAGCACGTATCCCCAAAAAACGGTGGCGTCTCTACCCCTTTAAAAATGATGAGGTGCTTCCAGTGATGTACATCCACCGGCAGAGCGCTTACCTCCTGGGCCGACACCGCCGCATCGCAGACATTCCCATCGATCACCCCTCCTGTTCAAAGCAGCATGCCGTCTTTCAGTACCGGCTTGTGGAATATACCCGTGCTGATGGGACAGTTGGCCGCAGGGTGAAGCCCTACATCATCGACCTTGGCTCAGGCAATGGAACGTTCCTGAACAACAAGCGAATTGAGCCCCAGAGATACTACGAACTGAAGGAAAAGGATGTCCTTAAATTTGGGTTCAGCAGCAGAGAGTATGTTCTGCTCCATGAGTCCTCTGACACCTCTGAAGTAGACAGGAAGGAAGACGAGGATGACGAGGAGGAGGAGGAAGTATCTGACAGCTAG

Related Sequences

bmy_02126T0 Protein

Length: 375 aa      View alignments
>bmy_02126T0
MKEVKSERDRGSRRRHRDGDMVAAAVVVKQERLSPESVPPVHRRPDSSGGSPSPPAGESGRPSHRGNRARGGSRSPAKKKNKSSGRRSKSPRSKRSRSPHHSTVKVKQEHRRARNSDRDRHRGHSHQRRSSVERPGSGQPQGRDRDAQNLQAQESEREFHNARRREHRQKNEAGGNASQDSLPQPGPGSNNKDKEVPVKEKPSFELSGALLEDTNTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPVMYIHRQSAYLLGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIEPQRYYELKEKDVLKFGFSSREYVLLHESSDTSEVDRKEDEDDEEEEEVSDS*