Part of scaffold_53 (Scaffold)

For more information consult the page for scaffold_53 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ZC3H12A ENSTTRG00000008591 (Bottlenosed dolphin)

Gene Details

zinc finger CCCH-type containing 12A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008144, Bottlenosed dolphin)

Protein Percentage 91.06%
cDNA percentage 91.61%
Ka/Ks Ratio 0.27599 (Ka = 0.0639, Ks = 0.2314)

ZC3H12A ENSBTAG00000011316 (Cow)

Gene Details

Ribonuclease ZC3H12A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015041, Cow)

Protein Percentage 88.08%
cDNA percentage 87.75%
Ka/Ks Ratio 0.12595 (Ka = 0.068, Ks = 0.5401)

ZC3H12A  (Minke Whale)

Gene Details

zinc finger CCCH-type containing 12A

External Links

Gene match (Identifier: BACU009683, Minke Whale)

Protein Percentage 90.4%
cDNA percentage 93.05%
Ka/Ks Ratio 0.37886 (Ka = 0.0583, Ks = 0.154)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 909 bp    Location:2449658..2442150   Strand:-
>bmy_02128
ATGAGTCTGTGGGAGCTTGAAGACGGCCACAGCTGCCAAGGGACCCCCAGGCCGGCCCAGGAGTCCACGGCTGAGGAGGCAAGGACTGCAGAGCTGCAGATGAAGGTTGACTTCTTCCGGAAGCTGGGCTACTCATCTGCTGAGATCCACAGTGTCCTGCAGAAGCTGGGGGTCCAGGCAGACACCAACACTGTGCTGGGCGAGCTGGTGAAACATGGGTCAGCGGCCGAGCGGGAGCGCCAGGCATCGCCGGACCCCTGCCCTCAGCTGCCTCTGGTCCCCCGGGGTGGGGGCAACCCCAAGGCCCCCATCCTGGAGCCCTCTCCCCCCGAGGAGGACAAGGAGGGCAGTGACCTGAGGCCCGTGGTCATCGATGGGAGCAACGTGGCTATGAGCCACGGGAACAAGGAGGTCTTCTCTTGCCGGGGTATCCTCCTGGCAGTGAACTGGTTTCTGGAGCGGGGCCACACAGACATCACAGTGTTTGTACCATCTTGGAGGAAGGAGCAGCCTCGGCCCGATGTGCCCATCACAGACCAGCATATCCTGCGGGACCTGGAGAAGAAGAAGATCCTGGTGTTCACGCCGTCGAGGCGCGTGGGCGGCAAGCGCGTGGTCTGCTATGACGACCGCTTCATCGTGAAGCTGGCCTTCGAGTCCGACGGCATCGTGGTCTCTAATGACACTTACCGGGACCTCCAGGGCGAGCGGCAGGAGTGGAAGCGCTTCATCGAGGAGCGGCTGCTCATGTACTCCTTCGTCAACGACAAGTACATTCCCGCCACCGCAGGGAGGTGCCTGTGGGAGGGATGGAGCTGGGGCAGCTCTGCTGCGGGGCGGTGGCCTTGGGTCCAGGCAGCAGGCCCCACGTGGGAAGGGTCAGGCTGGGACCAGACGGGGGCTTTCTAA

Related Sequences

bmy_02128T0 Protein

Length: 303 aa      View alignments
>bmy_02128T0
MSLWELEDGHSCQGTPRPAQESTAEEARTAELQMKVDFFRKLGYSSAEIHSVLQKLGVQADTNTVLGELVKHGSAAERERQASPDPCPQLPLVPRGGGNPKAPILEPSPPEEDKEGSDLRPVVIDGSNVAMSHGNKEVFSCRGILLAVNWFLERGHTDITVFVPSWRKEQPRPDVPITDQHILRDLEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAFESDGIVVSNDTYRDLQGERQEWKRFIEERLLMYSFVNDKYIPATAGRCLWEGWSWGSSAAGRWPWVQAAGPTWEGSGWDQTGAF*