Sequence detailsbmy_02145 (Coding sequence)

Part of scaffold_56 (SequenceType object (1))

For more information consult the page for scaffold_56 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

POT1ENSTTRG00000002829 (Bottlenosed dolphin)

Gene Details

protection of telomeres 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002652, Bottlenosed dolphin)

Protein Percentage 86.88%
cDNA percentage 88.59%
Ka/Ks Ratio 0.56381 (Ka = 0.0688, Ks = 0.1221)

POT1ENSBTAG00000013180 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000017541, Cow)

Protein Percentage 84.58%
cDNA percentage 88.39%
Ka/Ks Ratio 0.42334 (Ka = 0.0996, Ks = 0.2354)

POT1 (Minke Whale)

Gene Details

protection of telomeres 1

External Links

Gene match (Identifier: BACU006832, Minke Whale)

Protein Percentage 92.04%
cDNA percentage 94.36%
Ka/Ks Ratio 0.82018 (Ka = 0.057, Ks = 0.0695)

Additional orthologs identified in other species via the OPTIC pipeline.

POT1 (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 1812 bp    Location:702125..665049   Strand:-
Raw sequence 
>bmy_02145
GACTTTATTAAAGGGAAGAATAATGTTTGGTGTTTTGAACTCAGTATTATTTTGTCAAATGCTTTGAAATACGAAAAGTCAGATTATTGCTCAGTTGTAACAATTGTGGACCAGACGCATGTAAAGTTAACCTGCCTGTTCTTTAGTGGAAATTATGAAGCCCTTCCAATGATTTATAAAAATGGAGATATTGTTCGCTTTCACAGGCTGAAGATCCAAGTATATAAAAAGGAGACTCAAGGTATCACCAGCTCTGGCTTTGCGTCTTTGACATTTGAGGGAACTTTGGGAGCTCCTATCATACCTCGTACTTCAAGCAAGTGTTTTAACTTCACCGCTGAGGACCACAAAATGGTAGAAGCCTTACGTGTTTGGGCATCTACTCATATTTCACCTTCTTCAACGTTAGTGAAATTGTGTGATGTCCAGCCAATGCAGTATTTTGACCTGACTTGTCAGCTCTTGGGCAAAGCAGAAGTGGATGGAGCATCATTTCTTCTAAAGGTATGGGATGGCACCAGGACCCCATTCCCATCTTGGAGAGTCTTAATACAAGACCTTGTTCTTGAAGGTGATTTAAGTCACATCCACCGGGTGCAGAATCTGACAATAGACATTTTAGTCTATGACAACCATGTTCAAGTGGCCAAATCTTTAAAGGTTGGAAGCTTTCTTAGAATTTATAGCCTCCATACCAAACTTCAGTCAGTCAATTCAGAGAACCTGGCAACATTTTTAGCCCTAGAGTTTCATCTCCATGGAGGCACCAGTTATGGTCGGGGAATCAGAGTCTTGCCAGAAAGTAACTCTGATGTGGATCAACTGAAAAATGAGTATTATGAAGGGGATTCATGTCAGGAATATACATATATCCTTGCAGATTTCTCTAACTTAATTCAAAAATTCTTTATAGTACTTACGGATCATCAGTATTTGGAGAAAACCCCACTGTGTGCTATTTTGAAACAAAAAGCTCCTCAACAATATCGTATCCGAGCAAAATTGAGGTCATATAAGCCCAGAAGACTCTTTCAGTCTGTTAAACTTTATTGTCTTAAGTGTCATTCACTGCAAGAAGTTCCACATGAGGGTGATTTGGATATAATTTTGCAAGAGGGTGCAACCAAAACCCCAGATAGCAAACTACAAAATACATCATTATATGATTCAAAAATCTGGACCACTAAAGATCAAGGAGAACGAAAAGTAGCTGTTCATTTTGTGAAAAATAATGGTATTCTCCCACTTTCAAATGACTGTCTAATTTTGATAGAAGGAGGTACACTTAATGAAATCTGCAAACTCTCAAACAAGTTTCATAGTGTAATTCCTGTGAGATCTGGCCATGAAGACCTGGAAGTCCTCGACCTTTCAGCACCATTCCTTATACAAGGAAAAATACATCACTATGGATGTAAACAGTGTTCTAGTTTGAGACCAATACAGAATCTAAATTCCCTGGTTGATAAAACATCGTGGATTCCTTCTTCTGTGGCAGAAGTACTGGGTATTGTACCTCTCCAACATGTGTTTGTGATGACATTTACTCTTGACGATGGAACAGGAGTATTGGAAGCTTACCTCATGGATTCTGAAAAATTTTTCCAGATTCCAGCATCAGAAGTCCTAATGAATGATGGCCTTCAGCAAAGTATGGATATGATCATGGATATGTTTTGTCCTCCAGGAGTAAAAATTGATGCATATCCATGGTTGGAATGCTTCATCAAGTCGTATAATGTCACAAGTGGAGCGGAGCAGCAAATTTGCTATCAGATTTTTGACACCACAGTTGCGGAAGATCTTATCTAA

Related Sequences

bmy_02145T0 SequenceType object (3)

Length: 604 aa      View alignments
>bmy_02145T0
DFIKGKNNVWCFELSIILSNALKYEKSDYCSVVTIVDQTHVKLTCLFFSGNYEALPMIYKNGDIVRFHRLKIQVYKKETQGITSSGFASLTFEGTLGAPIIPRTSSKCFNFTAEDHKMVEALRVWASTHISPSSTLVKLCDVQPMQYFDLTCQLLGKAEVDGASFLLKVWDGTRTPFPSWRVLIQDLVLEGDLSHIHRVQNLTIDILVYDNHVQVAKSLKVGSFLRIYSLHTKLQSVNSENLATFLALEFHLHGGTSYGRGIRVLPESNSDVDQLKNEYYEGDSCQEYTYILADFSNLIQKFFIVLTDHQYLEKTPLCAILKQKAPQQYRIRAKLRSYKPRRLFQSVKLYCLKCHSLQEVPHEGDLDIILQEGATKTPDSKLQNTSLYDSKIWTTKDQGERKVAVHFVKNNGILPLSNDCLILIEGGTLNEICKLSNKFHSVIPVRSGHEDLEVLDLSAPFLIQGKIHHYGCKQCSSLRPIQNLNSLVDKTSWIPSSVAEVLGIVPLQHVFVMTFTLDDGTGVLEAYLMDSEKFFQIPASEVLMNDGLQQSMDMIMDMFCPPGVKIDAYPWLECFIKSYNVTSGAEQQICYQIFDTTVAEDLI*