Part of scaffold_55 (Scaffold)

For more information consult the page for scaffold_55 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LTV1 ENSTTRG00000008789 (Bottlenosed dolphin)

Gene Details

LTV1 homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008329, Bottlenosed dolphin)

Protein Percentage 88.56%
cDNA percentage 91.5%
Ka/Ks Ratio 0.46656 (Ka = 0.0778, Ks = 0.1667)

LTV1 ENSBTAG00000032163 (Cow)

Gene Details

Protein LTV1 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021934, Cow)

Protein Percentage 87.39%
cDNA percentage 89.15%
Ka/Ks Ratio 0.32226 (Ka = 0.0869, Ks = 0.2697)

LTV1  (Minke Whale)

Gene Details

LTV1 ribosome biogenesis factor

External Links

Gene match (Identifier: BACU003659, Minke Whale)

Protein Percentage 92.08%
cDNA percentage 93.84%
Ka/Ks Ratio 0.48588 (Ka = 0.0545, Ks = 0.1123)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1026 bp    Location:1197489..1212031   Strand:+
>bmy_02152
ATGCCTCACAGGAAGAAAAAGCCCTTTATAGAGAAGAAGAAAGCTGTGTCTTTTCACCTGGTCCACCGGAGCCAACGAGATCCTTTAGCAGCAGATGAGACTGCACCCCAGCGGGTTCTGTTGCCTACACAGAAAATAAAAGATGAAGAAAGGCGAGCAGAGCAGAGGAAGTATGGCGTGTTCTTTGATGATGACTATGACTACCTGCAGCACCTGAAGGAACCGTCTGGGCCCTCAGAGCTCGTTCCCACAGATACCTGTGGTGCACCTTACAGGGAAGATGAGAAAGAAGAAGCTTTAGCAACTTCAACCACTGGAATTAAATTGCCTTCCTCAGTGTTTGCATCAGAGTTTGAAGAAGATGTTGGATTGTTAAATAAAGCAGCTCCTGTTTCAGGCCCTCGGCTGGATTTTGATCCTGACATTGTCGCGGCTCTTGATGATGATTTTGATTTTGATAATCCGGATAATCTACTTGAAGATGATTTTATTCTTCAGGCCAATAAGCCAACAGAAGAGGAAGAGGGAATGGAGATACAGAAATCTGAGGCTGAAGATGACAGTGAGTGGGAAGATGTGGATGATGAGAAGGAAAGAGGTAGTGATGATGATAAATATGACCCTGCAGGCTCATCAGATGAGGATATGTCTTCCCCTGGAAAACCTCTTGGGGCTGTAGAAAATCACTTGTTCTGGGAAGAAGAAACGAAAAGTCGCTTTACTGAGTATTCTTTGACGTCCTCGGTCATGAGGAGAAATGAACAGCTGACCCTGCATGATGAGAGATTTGAGAAGTTTTATGAGCAGTATGATGATGATGAAATTGGAGCTCTGGATAATGCTGAATTGGAAGGTTCCATTCAAGTAGACAGCAATCGCTTAGAGGAAGTTTTGAATGACTACTATAAAGAGAAGGCAGAGAAGTATGGTGACTTTTCTTTGATTACTTCCTTTTTTTTGTTTCAAATAAAGTCTGTAATCGCACCGCTGAATCTAGAAAATCACCCAGTCAAGATCCATGTTTAG

Related Sequences

bmy_02152T0 Protein

Length: 342 aa      View alignments
>bmy_02152T0
MPHRKKKPFIEKKKAVSFHLVHRSQRDPLAADETAPQRVLLPTQKIKDEERRAEQRKYGVFFDDDYDYLQHLKEPSGPSELVPTDTCGAPYREDEKEEALATSTTGIKLPSSVFASEFEEDVGLLNKAAPVSGPRLDFDPDIVAALDDDFDFDNPDNLLEDDFILQANKPTEEEEGMEIQKSEAEDDSEWEDVDDEKERGSDDDKYDPAGSSDEDMSSPGKPLGAVENHLFWEEETKSRFTEYSLTSSVMRRNEQLTLHDERFEKFYEQYDDDEIGALDNAELEGSIQVDSNRLEEVLNDYYKEKAEKYGDFSLITSFFLFQIKSVIAPLNLENHPVKIHV*