Part of scaffold_55 (Scaffold)

For more information consult the page for scaffold_55 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ZC2HC1B ENSBTAG00000008159 (Cow)

Gene Details

Zinc finger C2HC domain-containing protein 1B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010726, Cow)

Protein Percentage 76.0%
cDNA percentage 82.17%
Ka/Ks Ratio 0.66022 (Ka = 0.1876, Ks = 0.2842)

ZC2HC1B  (Minke Whale)

Gene Details

zinc finger, C2HC-type containing 1B

External Links

Gene match (Identifier: BACU003660, Minke Whale)

Protein Percentage 80.87%
cDNA percentage 85.06%
Ka/Ks Ratio 0.81477 (Ka = 0.1616, Ks = 0.1983)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 771 bp    Location:1221129..1246966   Strand:+
>bmy_02153
GGCAATCAGGAATTATTTCCCTGTGAAGTCTGTGGAAGACGCTTTGCAGCAGATGTTCTGGAAAGGCATGGACCAATATGTAGAAAACTGTTCAACAAAAAGCGTAAAGCTTTCAATTCCTTAAAACAAAGATTACAGGGCACTGACATTCCCACTGTGTGGAAGGCTCCTCAATCCAAGCCTCAACCCATGAGAAAATCTAACTGGAGACAACAACATGAAGACTTCATTAATGTGATTCGATCAGCAAAGCAGTGTACACTAGCCATTAAAGAAGGCCGGCCTCTCCCAGCTCCACCCCCTCCGTCCATCAACCTAGATTATATTCAACATCCATATTATTTAATGAAACCACAGCCAATCGGCACATTAATTTCTGCAAGGATCAATCTTCTTGCTGAGTCTTTGATCCAGCCCAGGCAGCAGCCAAATTGGCATCCAGGGGTTCAGATGAGTCCAGAAAAAGGAACAACTGTAACCAGTGCTGTGGGAGCTCTGCTGCAGAACAGGGCCCTGGAGGCCAGTGTGGTCCCAACCAGGCCAGTGGGATATAAAAGTCCTAAGGGAATCAAGAGATCAACTTTGCTGAGGAGGCTTTATGGAGGAGGTGACAGTCTGAGAGAGAGGAAGCTTCATAGAGGATTAGCAGTGGACCCTGCTTCTGGAGCAAAATTCAGACAAGGATTTACTAAATCTTCTAAAAAAAGATTAACTCCTAGAGGCCAGGTAAATCAGGTATGTGTTCCGGAATTGACTGAAGACTCATGTAAC

Related Sequences

bmy_02153T0 Protein

Length: 257 aa      View alignments
>bmy_02153T0
GNQELFPCEVCGRRFAADVLERHGPICRKLFNKKRKAFNSLKQRLQGTDIPTVWKAPQSKPQPMRKSNWRQQHEDFINVIRSAKQCTLAIKEGRPLPAPPPPSINLDYIQHPYYLMKPQPIGTLISARINLLAESLIQPRQQPNWHPGVQMSPEKGTTVTSAVGALLQNRALEASVVPTRPVGYKSPKGIKRSTLLRRLYGGGDSLRERKLHRGLAVDPASGAKFRQGFTKSSKKRLTPRGQVNQVCVPELTEDSCN