Sequence detailsbmy_02170 (Coding sequence)

Part of scaffold_58 (SequenceType object (1))

For more information consult the page for scaffold_58 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRPA1ENSBTAG00000002062 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000002668, Cow)

Protein Percentage 85.07%
cDNA percentage 86.48%
Ka/Ks Ratio 0.32106 (Ka = 0.1031, Ks = 0.321)

Additional orthologs identified in other species via the OPTIC pipeline.

TRPA1 (Human)   Trpa1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2214 bp    Location:304939..253537   Strand:-
Raw sequence 
>bmy_02170
ATGCTGCAGAAGAAGGTCAAAAGGAGCAGCCTGCTACAATGGCACTTGGCACTGAGCTTTGCAGTGAATAGGCGTGCAGTAGGCATACTGAATGTGATGGATGATTATGGAAATACCCCTCTGCACTGGGCTGCAGAAAAAAACCAGGTGGAAAGTGTTAAGTTTCTTCTTCGCAAAGGAGCCAATCCAAACCTCCGAAACTGCGACATGATGGCCCCCCTGCACGTGGCTGTGTGGGGCTTAYACAACGACGTGATGAAGCTTAAGTGCAAGCACATGTTACAGTTTTATCAGAGACTTGCTGCAAAAGAAAAGGCCTCTAGTGAGGAACACGGGCATAGCAGACTGTCTCACATTAACTTTTTGAACAATGGGAAAGCTAGCCCTCTGCACATGGCAGTTCAAAGTGGTGACTTGGAAATGATTAAAATGTGCCTGGACAAGGGTGCACAGTTGGACCTGATGGAGGGAGCAGATATTGATATCACCGATTCTGAAGGACGTTCTCCACTTATRTTAGCAACTGCTTCCGCATCCTGGAATACCGTAGATTTGCTCCTCTCTAAAGGTGCCCGTGTAGACATAAAAGATAATCTTGGACGTAATTTTTTGCATTTGACTGTGCAGCAACCTTATGGATTAAAAAATTTGCGACCTGAGTTTTTGCAGATGCACCGTATTAAAGAGCTGGTGATGGACGAAGACAACGATGGGTGTACTCCTCTACACTATGCATGTAGACAGGGGGTCCCTGTCTCTGTAAATAACCTACTTGACTTTAACGTGTCCATTCATTCCAAAAGCAAAGATAAAAAATCACCCCTGCATTTTGCAGCCAGTTACGGGCGTATCAATACCTGTCAGAGGCTCCTCCAAGACATGAGTGACACAAGGCTTTTGAATGAAGGTGACCTTCATGGAATGACTCCTCTCCACCTGGCTGCAAAAAATGGGCATGATAAAGTAGTTCAGCTCCTTCTGAAAAAAGGTGCATTATTTCTCAGTGACCACAATGGCTGGACTGCTTTGCATCACGCTTCCTTGGGAGGGTACACGCAGACCATGAAGGTCATTCTTGACACTAACATGAAGTGCACAGATCGGCTAGATGAAGAAGGGAATACCGCGCTTCACTTTGCGGCAAGGGAGGGCCACGCCAAAGCCGTCGCACTGCTCTTGAGGTACGATGCCGACATCGTCCTGAACAAGCAGCAGGCCTCCTTCCTGCACACTGCTATTCACAATAAGAGAAAGGAGGTGGTTCTCACGACCGTCAGGGACAAAAGTTGTTTAAGGAATATTAAAAATAATGTTACTAGAGTTCCAGAATCTCAAAAGATGATCGAGTATAATTTCAGATATCTTCAATGTCCATTAGAATTCACCGAAAAAGTAGCAGCTGTACAGGATGTTACATACGAGCCTCTTTCAACGCTCAATAATTCCTATACCATAAATATCTGTATGATTTTAGTCTTGTTATCAAGTATATTTGGATATTGCAAGGAAGTGGCCCAAATTTTCCAACAGAAAAGGAATTACTTTTTGGATAATAACAATGCAGTTGAATGGATTATCTACACAACAAGCATCATTTTTGTGTCACCCTTGTTCGTCAGTATACCAGCTTATGTGCAGTGGCAATGTGGAGCAATTGCTATATACCTCTATTGGATGAACTTCTTATTGTATCTTCAGAGATTTGAAAATTGTGGAATTTTTATCGTGATGTTGGAGGTGATCATGAAAACGCTGTTGAAATCTACAGTTGTGTTTGTCTTCCTTCTTGTGGCTTTTGGACTCAGCTTTTACGTCCTCCTGAGTATACAGATTGGTTTGGCAGTTGGTGACATTGCTGAGGTCCAGAAGCATGCATTGTTGAAGAGGATTGCCATGCAGGTGGAACTTCATACCAGCCTGGAGAAGAAGCTGCCGCTCTGGTTCTTACACAAAGTCGATCAGAAATCCACCGTCGTGTATCCCAACAGACCCAGATATGGTGAAGGGCTGCTGAAGGATCTCAGTTCTCTTCTGGAAAAACAGCATGAGCTTATTAAACTCATCACTCAGAAGATGGAAATCATCTCTGAGACAGAGGATGAAGATTACCACAGTTCTTTTCAAGACAGGTTTAAGAAACAGCAGTTAGAACAAAGGAATAGCAAATGGAATTCTGTACGGAGAGCAGTAAAGGCAAAACCACACAGCCCTTAG

Related Sequences

bmy_02170T0 SequenceType object (3)

Length: 738 aa      View alignments
>bmy_02170T0
MLQKKVKRSSLLQWHLALSFAVNRRAVGILNVMDDYGNTPLHWAAEKNQVESVKFLLRKGANPNLRNCDMMAPLHVAVWGLXNDVMKLKCKHMLQFYQRLAAKEKASSEEHGHSRLSHINFLNNGKASPLHMAVQSGDLEMIKMCLDKGAQLDLMEGADIDITDSEGRSPLXLATASASWNTVDLLLSKGARVDIKDNLGRNFLHLTVQQPYGLKNLRPEFLQMHRIKELVMDEDNDGCTPLHYACRQGVPVSVNNLLDFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLQDMSDTRLLNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALHHASLGGYTQTMKVILDTNMKCTDRLDEEGNTALHFAAREGHAKAVALLLRYDADIVLNKQQASFLHTAIHNKRKEVVLTTVRDKSCLRNIKNNVTRVPESQKMIEYNFRYLQCPLEFTEKVAAVQDVTYEPLSTLNNSYTINICMILVLLSSIFGYCKEVAQIFQQKRNYFLDNNNAVEWIIYTTSIIFVSPLFVSIPAYVQWQCGAIAIYLYWMNFLLYLQRFENCGIFIVMLEVIMKTLLKSTVVFVFLLVAFGLSFYVLLSIQIGLAVGDIAEVQKHALLKRIAMQVELHTSLEKKLPLWFLHKVDQKSTVVYPNRPRYGEGLLKDLSSLLEKQHELIKLITQKMEIISETEDEDYHSSFQDRFKKQQLEQRNSKWNSVRRAVKAKPHSP*