Sequence detailsbmy_02180 (Coding sequence)

Part of scaffold_58 (SequenceType object (1))

For more information consult the page for scaffold_58 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000011532 (Bottlenosed dolphin)

Gene Details

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010936, Bottlenosed dolphin)

Protein Percentage 92.06%
cDNA percentage 96.03%
Ka/Ks Ratio 0.54918 (Ka = 0.037, Ks = 0.0674)

UBE2WENSBTAG00000008260 (Cow)

Gene Details

Ubiquitin-conjugating enzyme E2 W

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000010872, Cow)

Protein Percentage 98.45%
cDNA percentage 98.45%
Ka/Ks Ratio 0.19805 (Ka = 0.0096, Ks = 0.0483)

Additional orthologs identified in other species via the OPTIC pipeline.

UBE2W (Human)   Ube2w (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 543 bp    Location:1673636..1637333   Strand:-
Raw sequence 
>bmy_02180
ATGACTTTAAATGAAAAGAGTGTTCAAAATTCAATTACACAGTGGATTGTAGATATGGAAGGTGCACCAGGTACCTTATATGAAGGGGAAAAATTTCAACTTCTATTTAAGTTTAGTAGTCGATATCCTTTTGACTCTCCTCAGGTCATGTTTACTGGTGAAAATATTCCTGTTCATCCTCATGTTTATAGCAATGGTCATATCTGTTTATCCATTCTAACAGAAGACTGGTCCCCAGCGCTCTCAGTCCAATCAGTTTGTCTTAGCATTATTAGCATGCTTTCCAGCTGCAAAGAAAAGAGACGACCACCAGATAATTCTTTTTATGTTCGAACATGTAACAAGAATCCAAAGAAAACAAAATGGTGGTATCATGTATTTTGGTTTGAAAGATTATATATATGCTTGCTTGGGAAAAAGAGAGAATATATAATTGATGTTATGATACTTGTTGATGCCACTGTTATCATCCTCCTAGCAGAAGATAGTCCTACTGAGAAAATGAGCACTTTGATCATTCAGTCTTTGAACTTTAACCTTTGA

Related Sequences

bmy_02180T0 SequenceType object (3)

Length: 181 aa      View alignments
>bmy_02180T0
MTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKEKRRPPDNSFYVRTCNKNPKKTKWWYHVFWFERLYICLLGKKREYIIDVMILVDATVIILLAEDSPTEKMSTLIIQSLNFNL*