Sequence detailsbmy_02183 (Coding sequence)

Part of scaffold_58 (SequenceType object (1))

For more information consult the page for scaffold_58 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LY96ENSTTRG00000013567 (Bottlenosed dolphin)

Gene Details

lymphocyte antigen 96

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012874, Bottlenosed dolphin)

Protein Percentage 74.38%
cDNA percentage 81.54%
Ka/Ks Ratio 1.59602 (Ka = 0.2382, Ks = 0.1492)

MD2ENSBTAG00000008864 (Cow)

Gene Details

lymphocyte antigen 96 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000011670, Cow)

Protein Percentage 64.17%
cDNA percentage 73.61%
Ka/Ks Ratio 0.70187 (Ka = 0.3073, Ks = 0.4378)

LY96 (Minke Whale)

Gene Details

lymphocyte antigen 96

External Links

Gene match (Identifier: BACU011156, Minke Whale)

Protein Percentage 64.0%
cDNA percentage 72.0%
Ka/Ks Ratio 0.48958 (Ka = 0.2962, Ks = 0.6051)

Additional orthologs identified in other species via the OPTIC pipeline.

LY96 (Human)   Ly96 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 378 bp    Location:1783822..1819932   Strand:+
Raw sequence 
>bmy_02183
AACTTGAAATTCCCTATTTCTATAAATGCCGAGCCCTGTATAACATTGAAGGGAGGCCATGGAAATCTGTATCTTTACTACATTCCAAGAAGAGACATAAAAAGCTTATATTTCAATATCTATGTATCTTTTAAGTCCGTGAATTTCCCAGTGCGCAAAGAAGTTATTTGCCGAGGATCTGATGATCATTATTCTTTTTGCAGAGCTCTGAAGGGAGAGACTGTGAATACAACAATATCATTCTCCTTCAAGGGAATACGATTTTCTAAGCCAAAGAGGCATGGTGGACCCTGCCCCTCACACTGTGCTTCTGGACCCATGACTTATGGGGTGAGCCCAGAGGCCGACCCAGGAGCCTTTCTCCACTGGAAACAGTAG

Related Sequences

bmy_02183T0 SequenceType object (3)

Length: 126 aa      View alignments
>bmy_02183T0
NLKFPISINAEPCITLKGGHGNLYLYYIPRRDIKSLYFNIYVSFKSVNFPVRKEVICRGSDDHYSFCRALKGETVNTTISFSFKGIRFSKPKRHGGPCPSHCASGPMTYGVSPEADPGAFLHWKQ*