Part of scaffold_59 (SequenceType object (1))

For more information consult the page for scaffold_59 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000015763 (Bottlenosed dolphin)

Gene Details

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014935, Bottlenosed dolphin)

Protein Percentage 96.63%
cDNA percentage 98.13%
Ka/Ks Ratio 0.35427 (Ka = 0.0144, Ks = 0.0406)

RAB40BENSBTAG00000015387 (Cow)

Gene Details

ras-related protein Rab-40B

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000020449, Cow)

Protein Percentage 92.11%
cDNA percentage 93.33%
Ka/Ks Ratio 0.11914 (Ka = 0.0357, Ks = 0.2997)

RAB40B (Minke Whale)

Gene Details

RAB40B, member RAS oncogene family

External Links

Gene match (Identifier: BACU011654, Minke Whale)

Protein Percentage 98.95%
cDNA percentage 98.6%
Ka/Ks Ratio 0.116 (Ka = 0.0064, Ks = 0.0554)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 573 bp    Location:71172..73328   Strand:+
>bmy_02214
GGTGTGATCCTGGTCTACGACATCGCAAACCGCTGGTCCTTTGATGGCATCGACCGGTGGATTAAGGAGATCAATGAGCACGCCCCGGGGGTCCCTAAAATCCTGGTGGGGAACCGCCTGCACCTGGCCTTCAAGCGGCAGGTCCCCACGGAACAGGCCCAGGCCTATGCGGAGCGCCTGGGTGTGACATTCTTCGAGGTCAGCCCGCTGTGCAATTTCAACATCACTGAGTCCTTTATGGAGCTGGCCAGGATCGTGCTGCTGCGGCATGGGATGGACCGGCTCTGGAGGCCAAGCAAGGTGCTGAGCTTGCAGGACCTGTGCTGCCGGGCAGTGGTGTCCTGCACGCCCGTGCACCTGGTGGACAGGCTGCCGCTGCCCACGGCCCTCAGGAGCCACCTCAAGTCCTTCTCGATGGCCAGCGGCCTGAATGCCAGGGTGATGCACGGCCGCCCCTGTTCCCTCGTCACCAGCTCCGGCCACAAGAGGACCAGCCTTCGAAAAGCGAAGGCCGCCCACCTTCCCCAGAGTCCCCCCAGACACTGCACCAGAAACAGCTGCAAAGTCTCCTGA

Related Sequences

bmy_02214T0 SequenceType object (3)

Length: 191 aa      View alignments
>bmy_02214T0
GVILVYDIANRWSFDGIDRWIKEINEHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFMELARIVLLRHGMDRLWRPSKVLSLQDLCCRAVVSCTPVHLVDRLPLPTALRSHLKSFSMASGLNARVMHGRPCSLVTSSGHKRTSLRKAKAAHLPQSPPRHCTRNSCKVS*