Part of scaffold_59 (SequenceType object (1))

For more information consult the page for scaffold_59 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NARFENSTTRG00000013146 (Bottlenosed dolphin)

Gene Details

nuclear prelamin A recognition factor

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012474, Bottlenosed dolphin)

Protein Percentage 81.94%
cDNA percentage 82.25%
Ka/Ks Ratio 0.25817 (Ka = 0.0068, Ks = 0.0262)

NARFENSBTAG00000018178 (Cow)

Gene Details

nuclear prelamin A recognition factor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000024191, Cow)

Protein Percentage 95.6%
cDNA percentage 94.06%
Ka/Ks Ratio 0.10073 (Ka = 0.0205, Ks = 0.2035)

NARF (Minke Whale)

Gene Details

nuclear prelamin A recognition factor

External Links

Gene match (Identifier: BACU011651, Minke Whale)

Protein Percentage 98.99%
cDNA percentage 99.41%
Ka/Ks Ratio 0.42561 (Ka = 0.0045, Ks = 0.0106)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 1614 bp    Location:243306..224047   Strand:-
>bmy_02217
CAGAGCCCTAAAGCGTGGAGCCGCACCGCCCTCTGCGCGCTCCTGTTGGTTCAGGCTTGTGGCTCGCTCGCTCCCGGAGCTTTCATTGGTCGAGCGGAGCGGCGAAGGGTGGGGCCGCGTCGGAGCAAAGACAACAAAGGGTGGCGGGCGGTGGGTGGCGGTGACCGCGTCTCCCGGTGCTCCGCCAAGGCCGCGCACCCGGACCTGCCAGCCCCGCTCCAGATGAAGTGTGAGCACTGCACGCGGAAGGAATGTAGTAAAAAAACAAAAACCGATGACCAAGAGAATGCATCAGTCGATGTACCAAGTCCAGCCCACGAGAATGGAGAGGCAAGTAGATTTTTCAGTTTTGTATCAGCCTGGAGTAAACAGCTGCTGCTGTTTTTCTCCTCTTTGGGGGCTCACATCACCAGGTACATCATTGCTAAAGGAGAATTCCATAAATTGGCTGATGCCAAGATATTTCTGAGTGACTGCCTGGCCTGTGACAGCTGTGTGTCTGCAGAGGAAGGAGTCCAGGTTTCCCAGCAGAACGCCAAGGACTTCTTCCGAGTTCTGAACCTTAACAAGAAATGTGATACCTCAAAGCACAAGGTGCTGGCAGTGTCGGTATGTCCTCAGTCTCTGCCTTATTTTGCTGCTAAATTCAGCCTCAGTGTGACTGATGCATCCAGAAGACTCTGTGGCTTCCTCAAAAGTCTTGGGGTGCATTATGTCTTCGATACAACAATCGCTGCAGATTTCAGCATCCTGGAGAGTCAAAAAGAATTTGTGCATCGATTCCGCCAGCACAATGAGGAAGAGCCCACGTTACCCATGCTGACCTCTGCCTGTCCTGGCTGGGTCCGATATGCTGAGCGGGTGCTAGGTCACCCTGTCACCCCCCACCTCTGCACTGCCAAGTCTCCCCAGCAGATTATGGGATCCCTGGTGAAGGACTACTTTGCCAGACGGCAGAACCTGTCCCCAGACAAGATTTTCCATGTCATCGTGGCCCCTTGCTATGACAAGAAGCTGGAGGCCCTTCAGGAAGACGTTCTCACGGCCTCGAGGGGTTCCCGGGGCACTGACTGCGTGCTAACCTCAGGTGAAATCACTCAGATGATGGAACAAAGTGACCTCTCGGTGAGAGACGCTGCTCTGGACACTCTGTTTGGAGACGTGAAGGAAGAGGAGGTTAGGCGCCATGACGGAGCCAGCTCCGACGGATACCTGGCGCACATCTTCAGACACGCGGCCAAGGAGCTGTTCAACGAGGACGTGGGGGAGGTCACCTACCGCGCCCTGAGGAACAGAGACTTCCAGGAGGTCACCCTCGAGAAGAGCGGGGAGGTTCTCTTGCGCTTTGCTGCTGCTTATGGCTTTCGAAACATCCAGAACGTGGTCCTAAAGCTGAAGAAGGGCAAGTTCCCGTACCACTTTGTGGAGGCCCTGCTGCAGAAGATGAAAGGCATCTACACTGACATCCCCGTGCGGCTCCCGGAGACCAGTGCCCATGTGCAGGAGCTGTACCAGGAGTGGCTGGATGGCACCGACTCCCCCCGAGTCCAGGAAGCCCTGCATACCGCATACCAGGGCCCAGGGCATCCTGCTAACAGCCGAGACATCAAGTGG

Related Sequences

bmy_02217T0 SequenceType object (3)

Length: 538 aa      View alignments
>bmy_02217T0
QSPKAWSRTALCALLLVQACGSLAPGAFIGRAERRRVGPRRSKDNKGWRAVGGGDRVSRCSAKAAHPDLPAPLQMKCEHCTRKECSKKTKTDDQENASVDVPSPAHENGEASRFFSFVSAWSKQLLLFFSSLGAHITRYIIAKGEFHKLADAKIFLSDCLACDSCVSAEEGVQVSQQNAKDFFRVLNLNKKCDTSKHKVLAVSVCPQSLPYFAAKFSLSVTDASRRLCGFLKSLGVHYVFDTTIAADFSILESQKEFVHRFRQHNEEEPTLPMLTSACPGWVRYAERVLGHPVTPHLCTAKSPQQIMGSLVKDYFARRQNLSPDKIFHVIVAPCYDKKLEALQEDVLTASRGSRGTDCVLTSGEITQMMEQSDLSVRDAALDTLFGDVKEEEVRRHDGASSDGYLAHIFRHAAKELFNEDVGEVTYRALRNRDFQEVTLEKSGEVLLRFAAAYGFRNIQNVVLKLKKGKFPYHFVEALLQKMKGIYTDIPVRLPETSAHVQELYQEWLDGTDSPRVQEALHTAYQGPGHPANSRDIKW