Sequence detailsbmy_02251 (Coding sequence)

Part of scaffold_59 (SequenceType object (1))

For more information consult the page for scaffold_59 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ALYREFENSTTRG00000012275 (Bottlenosed dolphin)

Gene Details

Aly/REF export factor

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011643, Bottlenosed dolphin)

Protein Percentage 97.18%
cDNA percentage 98.12%
Ka/Ks Ratio 0.6507 (Ka = 0.0168, Ks = 0.0258)

ALYREFENSBTAG00000008498 (Cow)

Gene Details

THO complex subunit 4

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000011202, Cow)

Protein Percentage 100.0%
cDNA percentage 96.44%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.119)

Additional orthologs identified in other species via the OPTIC pipeline.

ALYREF (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 537 bp    Location:776765..779710   Strand:+
Raw sequence 
>bmy_02251
CCGAAACAACTTCCTGACAAATGGCAACATGACCTTTTCGATAGCGGTTTTGGGGGTGGTGCCGGCGTGGAGACCGGTGGGAAACTGCTGGTGTCAAATCTGGATTTTGGAGTGTCTGACGCTGATATTCAGGAACTCTTTGCTGAATTTGGAACTCTGAAGAAGGCGGCTGTGCACTACGACCGATCCGGCCGCAGTTTAGGAACAGCTGATGTGCACTTTGAGCGGAAGGCAGATGCACTAAAAGCTATGAAACAGTACAACGGTGTCCCTTTGGATGGCCGCCCCATGAACATTCAGCTCGTCACCTCACAGATTGACACACAGCGGAGACCTGCACAGAGCGTAAACAGAGGCGGGATGACTAGAAACCGTGGTTCGGGAGGTTTTGGTGGTGGCGGTGGCACCCGGAGAGGCACCCGTGGAGGCAGCCGGGGCAGAGGCAGAGGAACCGGCAGGAGTTCAAAGCAGCAGCTTTCTGCAGAGGAATTGGACGCCCAGCTGGATGCTTACAATGCAAGAATGGACACCAGTTAA

Related Sequences

bmy_02251T0 SequenceType object (3)

Length: 179 aa      View alignments
>bmy_02251T0
PKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQIDTQRRPAQSVNRGGMTRNRGSGGFGGGGGTRRGTRGGSRGRGRGTGRSSKQQLSAEELDAQLDAYNARMDTS*