Part of scaffold_59 (Scaffold)

For more information consult the page for scaffold_59 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FSCN2 ENSTTRG00000006435 (Bottlenosed dolphin)

Gene Details

fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006091, Bottlenosed dolphin)

Protein Percentage 95.74%
cDNA percentage 96.45%
Ka/Ks Ratio 0.16037 (Ka = 0.0205, Ks = 0.128)

FSCN2 ENSBTAG00000024932 (Cow)

Gene Details

Fascin-2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000034620, Cow)

Protein Percentage 97.52%
cDNA percentage 92.2%
Ka/Ks Ratio 0.02279 (Ka = 0.0148, Ks = 0.6507)

FSCN2  (Minke Whale)

Gene Details

fascin actin-bundling protein 2, retinal

External Links

Gene match (Identifier: BACU011612, Minke Whale)

Protein Percentage 97.87%
cDNA percentage 97.52%
Ka/Ks Ratio 0.13397 (Ka = 0.013, Ks = 0.0967)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 849 bp    Location:1019480..1013267   Strand:-
>bmy_02267
ATGCCCACCAATGGCCTGCACCAGGTGCTGAAGATCCAGTTTGGCCTCGTCAATGATACTGACCGTTACCTGACGGCTGAGAGCTTTGGCTTCAAGGTCAACGCCTCGGCACCCAGCCTCAAGAGGAAGCAGATGTGGGTGCTGGAGCCAGACCCGGGCCAGGGCACAGCAGTGCTGTTTCGCAGCAGCCACCTGGGCCGTTACCTGTCAGCCGAGGAGGACGGGCGCGTGGCCTGCGAGGCGGAGCGGCCGGGCCGTGACTGCCGCTTCCTGGTCCTGCCGCAGCCTGACGGGCGCTGGGTACTGCAGTCGGAGCCGCACGGCCGCTTCTTCGGCGGCACTGAGGACCAGCTGTCCTGCTTCGCCACAGCCATCACCCCGGCTGAGCTGTGGACCGTGCACCTGGCCATCCACCCGCAGGCCCACCTGCTGAGTGTGAGCCGGCGGCGCTACGCGCACCTGTGCCCGCAGGAGGACGAGATCGCGGCGGACAGCAACACACCGTGGGGCGTGGACGCGCTCGTCACGCTCATCTTCCAGAACCGGCAGTACTGCCTCAAGTCCTGCGACAGCCGCTACCTGCGCAGCGATGGCCGCCTTGTCTGGGAGCCCGAGGCTCGCGCCCGCTACACACTTGAGTTCAAGGCGGGCAAGCTGGCCTTCAAGGACTGTGACGGCCGCTACCTGGCGCCCGTGGGACCCGCAGGCACGCTCAGGGCTGGCCGCAACACACGGCCCGGCAAGGACGAGCTCTTCGACCTGGAGGAGAGTCACCCGCAGGTGGTGCTGGTGGCCGCCAACCACCGCTACGTGTCCGTGCGGCAAGGTAATGAGGGTGCGGCAAGGTAA

Related Sequences

bmy_02267T0 Protein

Length: 283 aa      View alignments
>bmy_02267T0
MPTNGLHQVLKIQFGLVNDTDRYLTAESFGFKVNASAPSLKRKQMWVLEPDPGQGTAVLFRSSHLGRYLSAEEDGRVACEAERPGRDCRFLVLPQPDGRWVLQSEPHGRFFGGTEDQLSCFATAITPAELWTVHLAIHPQAHLLSVSRRRYAHLCPQEDEIAADSNTPWGVDALVTLIFQNRQYCLKSCDSRYLRSDGRLVWEPEARARYTLEFKAGKLAFKDCDGRYLAPVGPAGTLRAGRNTRPGKDELFDLEESHPQVVLVAANHRYVSVRQGNEGAAR*