Sequence detailsbmy_02276 (Coding sequence)

Part of scaffold_59 (SequenceType object (1))

For more information consult the page for scaffold_59 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHMP6ENSTTRG00000000556 (Bottlenosed dolphin)

Gene Details

charged multivesicular body protein 6

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000522, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.01%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0483)

CHMP6ENSBTAG00000038745 (Cow)

Gene Details

charged multivesicular body protein 6

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000018623, Cow)

Protein Percentage 97.51%
cDNA percentage 96.68%
Ka/Ks Ratio 0.06294 (Ka = 0.0102, Ks = 0.1618)

Additional orthologs identified in other species via the OPTIC pipeline.

CHMP6 (Human)   Chmp6 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 642 bp    Location:1456298..1448929   Strand:-
Raw sequence 
>bmy_02276
ATGGGCAACCTGTTCGGCCGTAAGAAGCAGCAGAGCCGGGTCACGGAGCAGGACAAGGCCATCCTGCAACTGAAGCAGCAGCGGGATAAGCTGAAGCAGTACCAGAAGAGGATCACCCAGCAGCTGGAGCGGGAGCGGGAGATTGCCCGGCAGCTCCTGCGCGACGGCAGGAAGGAACGGGCCAAGCTGCTGCTCAAGAAGAAGCGATACCGGGAGCAGCTCCTGGACAAGACAGAAAACCAGATCACCAGCCTAGAGACCATGGTCCAGAGTATTGAGTTCACCCAGATTGAAATGAAGGTGATCGAGGGGCTGCAGTTTGGAAATGAGTGTCTGAATAAGATGCACCAGGTGATGTCCATAGAAGAGGTGGAGCGGATACTGGACGAGACGCAGGAGGCCGTGGAGTACCAGCGGCAAATAGATGAGCTGTTGGCAGGAAGCTTCACTCAGGAGGACGAAGATGCCATCCTGGAGGAGCTGGACGCAATCACTMAGGTAACAGGACCCCCGGCACTGACACAGGCCCAGGAACAGATAGAGCTGCCAGAGGTTCCTTCAGAGCCCCTTCCTGAAAAGATCCCAGAGAAAGTCCCCGTCAAGGCCAGGCCCCGACAGGCGGAAGTGGTGGCAGCCTCGTAA

Related Sequences

bmy_02276T0 SequenceType object (3)

Length: 214 aa      View alignments
>bmy_02276T0
MGNLFGRKKQQSRVTEQDKAILQLKQQRDKLKQYQKRITQQLEREREIARQLLRDGRKERAKLLLKKKRYREQLLDKTENQITSLETMVQSIEFTQIEMKVIEGLQFGNECLNKMHQVMSIEEVERILDETQEAVEYQRQIDELLAGSFTQEDEDAILEELDAITXVTGPPALTQAQEQIELPEVPSEPLPEKIPEKVPVKARPRQAEVVAAS*