Sequence detailsbmy_02284 (Coding sequence)

Part of scaffold_59 (SequenceType object (1))

For more information consult the page for scaffold_59 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC40ENSTTRG00000000512 (Bottlenosed dolphin)

Gene Details

coiled-coil domain containing 40

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000479, Bottlenosed dolphin)

Protein Percentage 93.13%
cDNA percentage 95.71%
Ka/Ks Ratio 0.53106 (Ka = 0.0378, Ks = 0.0711)

CCDC40ENSBTAG00000016017 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000021324, Cow)

Protein Percentage 87.27%
cDNA percentage 90.92%
Ka/Ks Ratio 0.20416 (Ka = 0.0611, Ks = 0.2995)

Additional orthologs identified in other species via the OPTIC pipeline.

CCDC40 (Human)   Ccdc40 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3396 bp    Location:2173639..2131492   Strand:-
Raw sequence 
>bmy_02284
ATGGCGGAGCCTGGCGGCCGGGCTGGCGGGTCTCACCTGGAAGGCAAATCTTCTGAAGGAGAAGAGGACCAGAATCATGAAGGCAACAGGGTATCACCGATAGAGAAGAGCAGTGACCAGAGAAATGAAGAAACTGAGGGTGCTACAGAGCATTCTGAAGGGGAAATCAAAAACGATGGGGAAGTCACAGCCCAGGGGAAAGATGAAGACGATGAGGAAGTCGAAATCCAAGGGGAAATGGAAACGAAAGAGGAATTCGAATTTGAAGAGGAGTTAGAATCTGATATTAAAGCCACGGCCCCTGAAGGGGAAGTCACTTCTCCAGATCTGGCTTACTCAGACATCAGTCCTGGGGAGGTGGCCAGAGATGAAGTTGGCCCCACATGCCGGCATGAAAGAGCAAGGAGGAAAACAGGTCTTGAAGACAGACAGGCCCCCGGCCCATCCAAATCCAGAGGAGTGGGGGTCATCTCCACAGAGCCCTCCCAGCAAGTATCAGGCTCATCTGAGCAAATGGACCAGGAATCGGGAGCGCTCCGGCAGAAGGTCTTTCCTCTGGGGGTTCAGCACCGCCTCGGACAGAGCCGGGGGAGCAGCGACACATCCCTGGACTTTGACGAGCCGCCTCTGGTTACAGAGGGCCCCTCCACACAGGAGCCAGAGCCTGATGCCCACCCCAGGGAAGGAGCCACATCCTCATTCCTGGACAGGATCCAGCAGTTAAGCATGGCCGAGGAAGGAGGCCTGGTGGAGAGTGTGGAGTCTGAGGCCAGCGACGAGGCCGAAGAAGACAGATCCCAGCTGGTGGTTTTGGACCCAAACCATCCCCTGATGATAAGATTCCAGGCTGCCCTGAAGACCTATCTTAACCGGCAAATAGAGAAACTGAGGCTGGAGCTTCAAGAGCTGGGCGTGGCCACCAAGCAAAGCCGAGTCCAGCGGCAGGAGCTGGGGGTGGACCTTTACGGGGTCCAGCAGCACCTGGCCCGCCTGCAGATGCAGCTCGAGAAGAGCCACGACCGCCACTCGATCACAGCGTGTGAGAGGCGGAAGAAGGAGGAGGAGCTGCAGAGCGTGCGCTTGCTCTACGCCAGGACCTGCGAGACCGCCAACGAGGAGCGCAAGAAGCTGGCAGCTCTGCAAACCGAGATGGAGACCCTGGCTCTGCATCTCTTCTACGTGCAGAACATAGACCAGGACGTGCGTGACGACATCCGGGTGATGAAGCGAGTCGTGAAGAAGTCGGAAGCCGAGCGCATGCAGGCCGAGTTGGAGAAGAAGCAGCAGGACCTGCACGTGGACCAGCTGACCACCCGAGCCAACCAGCTGGAAGAACAGATTGCCCTGTTCGAGGCCCAGTACCGCGCGCAGGCTGAGGACACCCGGACGCTCAGGAAGGCAGTGAGCGAGGCCTGCACAGAAATAGATGCCATCAACATGGAGAAAAAGCGCATCCTGCAGCAGTGGGCCACCAGCCTGGTGGGCATGAAGCATCGCGACGAGGCTCACAAGACCATCCAAGAGGCACTCAGCGAATGCCAGCATCAAGTCAAGTCCATGGATGGCGAGCTCGAAGCCTATAAGAGATCCATCATAAAGGAGGAAGAAAAGAATGAGAAGCTGGCCAGTATCCTGAACCGGGCAGAGACAGAAACCAGCCTGATGCAGAAACTGACTTCGCAGTGCCTGGCCAAGGAGGAGGCCCTGCAGAATGAGTTCAACACCTACAGGCTCACCCTGCTGGACACGGAGGACGCACTGGGCAAGGCCCACATGGAATACACGGCAACCGTGGGCGAATTGCAGACTCTCCACCAGACCATCCAGCATGAGCTGGAGCTGAGGAGGAAGATGGATGCCTCCATCGTGGAGAAGCTGCAAGAGCACATGACCTCCAACAAGATGACCAAGTACTTCCACCAGCTCATCCTGAAGCTCCAGAAGGAAAAGACCAACCTGGTGACACATCATTCCAAAATTGACGGTGACATTGCTCAGACCACCCTGGACATCACGAACACCAGCTGCAGGCTGGACATGCATCAGAAGACACTGGCCGAGCTGGACAAGGAAGTGAAAAAAGTCAACGACCTCATCACAAACAGTGAAAATGAAATCTCCAGGCGCACAATCCTGATTGAGAGAAAGCAAGGCCTCATCAACTTTTTGAACAAGCAGCTGGAGCAGATGATTTCTGAACTCGGGGGGGAAGAAGTGGTGCCCCTGGAGCTAGAGATCAAGAGGCTGACCAAGCTGATCGAGGAGCACAACGCCGGCGTGACGCAGGCCCAGGTGACCTGGCTCCGACTGCAGCAGGAGATGGTGACGGTCACGCAGGAGCGCGAGGAGCACCTGGCCTCCCTGGACATGTCCAAGAAGGACCTCCACATCCTGGAGCAGAAGAAACTACGGATAGAAAACAAGATCGACCAGGAGAAGCAGGAGCGGAAGCAGATCGAGCGGCACATGAGGGACCTGGACAGCGACCGGAAGAAGCTCACTGTGCTGATGGCCCAGAACCGATGCAGCTCCGAGGAGCTGCAGCAGGGCAACCTGGCCACCGAGGCCGAGTTCGTGCGCGCGCTCAAGGCCTCAGAGCGAGAGACCATCGAAATGCAGGAGAAGCTGAACGAGCTCAGGGAGGAGAAGGCGGCCGTGCTCAACAGCCTGGTGGAGGCGGAACACCAGATCATGCTTTGGGACAAAAAAATCCAACTGGCAAAAGAGATGCGCGCCTCAGTGGATTCCGAGACGGGCCAGACAGAGATCCGGGCCATGAAGGCCGAGATCCACAGGATGAAGGTCAAGCACGGCCAACTGCTGAAGCAGCAGGAGAAGATGATCCGGGACATGGAGCTGGYTGTCGCCCGCAGAGAGACCATCTCCACCCGGGCCGAGGGGGAGTGCAAGGTGGACAAGAATCTGCTCACCCGCACAGACTTCCACCGCAAGCAGACCGAGCTGAGACGGAAGATCAGGGACATTCACAAGGCCACCGAGGAGTGCACCCAAACCATCCTAGAACTGGAAGAAACTCAAAAATCCGTGAGCGACTCCCTCCTGGAGAAACAGGAGCAGCTGTCAAGGATGCAGGCCAAGGCCGACGAGCTCGAAGCTGACCTGTACCAGCTGGCAGCCCTCAAGCGACAGAACCTTTCCACGCTCGTGGCCCTGCAGTCACGCCTCAAGCACCTGCAGGCCGTGAAGGACGGGCGGTACAGCTTCCTGCTCCGCAATAAGCAATCACTGCTGGCAGAGCTCAAGCGGCTGGACGACCGCCTGGCCAGCATCAGCACCATCCTCCACCACGTGAAGGACGAGTACCCCCAGTTCCAGGAGGCCCTGCTCGAGGTCAGCCGGTCCATCAGCAACAGGCTGGAGTCATCTGGGCCCTAG

Related Sequences

bmy_02284T0 SequenceType object (3)

Length: 1132 aa      
>bmy_02284T0
MAEPGGRAGGSHLEGKSSEGEEDQNHEGNRVSPIEKSSDQRNEETEGATEHSEGEIKNDGEVTAQGKDEDDEEVEIQGEMETKEEFEFEEELESDIKATAPEGEVTSPDLAYSDISPGEVARDEVGPTCRHERARRKTGLEDRQAPGPSKSRGVGVISTEPSQQVSGSSEQMDQESGALRQKVFPLGVQHRLGQSRGSSDTSLDFDEPPLVTEGPSTQEPEPDAHPREGATSSFLDRIQQLSMAEEGGLVESVESEASDEAEEDRSQLVVLDPNHPLMIRFQAALKTYLNRQIEKLRLELQELGVATKQSRVQRQELGVDLYGVQQHLARLQMQLEKSHDRHSITACERRKKEEELQSVRLLYARTCETANEERKKLAALQTEMETLALHLFYVQNIDQDVRDDIRVMKRVVKKSEAERMQAELEKKQQDLHVDQLTTRANQLEEQIALFEAQYRAQAEDTRTLRKAVSEACTEIDAINMEKKRILQQWATSLVGMKHRDEAHKTIQEALSECQHQVKSMDGELEAYKRSIIKEEEKNEKLASILNRAETETSLMQKLTSQCLAKEEALQNEFNTYRLTLLDTEDALGKAHMEYTATVGELQTLHQTIQHELELRRKMDASIVEKLQEHMTSNKMTKYFHQLILKLQKEKTNLVTHHSKIDGDIAQTTLDITNTSCRLDMHQKTLAELDKEVKKVNDLITNSENEISRRTILIERKQGLINFLNKQLEQMISELGGEEVVPLELEIKRLTKLIEEHNAGVTQAQVTWLRLQQEMVTVTQEREEHLASLDMSKKDLHILEQKKLRIENKIDQEKQERKQIERHMRDLDSDRKKLTVLMAQNRCSSEELQQGNLATEAEFVRALKASERETIEMQEKLNELREEKAAVLNSLVEAEHQIMLWDKKIQLAKEMRASVDSETGQTEIRAMKAEIHRMKVKHGQLLKQQEKMIRDMELXVARRETISTRAEGECKVDKNLLTRTDFHRKQTELRRKIRDIHKATEECTQTILELEETQKSVSDSLLEKQEQLSRMQAKADELEADLYQLAALKRQNLSTLVALQSRLKHLQAVKDGRYSFLLRNKQSLLAELKRLDDRLASISTILHHVKDEYPQFQEALLEVSRSISNRLESSGP*