Part of scaffold_59 (Scaffold)

For more information consult the page for scaffold_59 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TBC1D16 ENSTTRG00000000511 (Bottlenosed dolphin)

Gene Details

TBC1 domain family, member 16

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000478, Bottlenosed dolphin)

Protein Percentage 98.05%
cDNA percentage 97.99%
Ka/Ks Ratio 0.12574 (Ka = 0.0097, Ks = 0.0773)

TBC1D16 ENSBTAG00000003192 (Cow)

Gene Details

TBC1 domain family member 16

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004147, Cow)

Protein Percentage 96.49%
cDNA percentage 93.83%
Ka/Ks Ratio 0.055 (Ka = 0.0174, Ks = 0.317)

TBC1D16  (Minke Whale)

Gene Details

TBC1 domain family, member 16

External Links

Gene match (Identifier: BACU011589, Minke Whale)

Protein Percentage 16.11%
cDNA percentage 37.79%
Ka/Ks Ratio 0.07808 (Ka = 1.3214, Ks = 16.9241)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1542 bp    Location:2241393..2252434   Strand:+
>bmy_02286
ATGACTTGCTCCACCAGCTCCCCCTCCAGCGTGGACGCCCACCTGCAGTTCCTGGACAGCAGTGGCCTCCTGCAGCCCCCGCGCTGGGACGAGCCGCAGCGGGCCTGCGCCTTGGAGCAGATCTGCGGTGTGTTCCGAGTGGACTTGGGTCACATGCGCTCCCTCCGCCTCTTCTTCAGCGATGAGGCCTGCACCAGCGGCCAGCTGGTCGTCGCCAGCCGGGAAAGCCAGTACAAGGTGTTCCACTTCCACCACGGTGGCCTGGACAAGCTGCCCGACGTGCTTCAGCAGTGGAAATACTGCGCAGAGACGCACCTCAAAGACCAGCAGGTCGCCGACGAAAAGACGTGCATGCAGTTCTCCATCCGGCGTCCCAAACTGCCCTCTTCCGAGACGCACCCCGAGGAGAGCATGTACCGACGGCTGGACGTCGCGGCCTGGCTCCGCCACCTGAACGCGCTGGGCCAGGTGGAGGAGGAGTACAAGCTCCGCAAGGCCATTTTCTTCGGCGGCATTGATGTGTCAATCCGGGGGGAGGTCTGGCCCTTCCTGCTGCGTTATTACAGCCACGAGTCGACGTCGGAGGAGAGGGAGGCGCTGCGGCTGCAGAAGAGAAAGGAATACGCCGAGATCCAGCAGAAAAGGCTCTCCATGACCCCTGAAGAGCACAGAGCGTTCTGGAGGAACGTGCAGTTCACCGTGGACAAGGATGTGGTACGGACAGATCGAAGCAACCAGTTCTTCCGAGGAGAAGGCAATCCCAATGTGGAGAGCATGAGGAGGATCCTGCTGAACTATGCGGTGTACAACCCAGCCATTGGCTACTCCCAGGGCATGTCAGACCTGGTGGCCCCCATCCTGGCCGAGGTCCTGGACGAGTCAGACACCTTCTGGTGCTTTGTGGGTTTGATGCAGAACACGATCTTTGTCAGCTCTCCTCGGGATGAGGACATGGAGAAACAGCTGCTGTACCTGCGGGAGCTGCTGCGGCTGACGCACCTGCGCTTCTACCAGCACCTGGTCTCGCTGGGCGAGGACGGCCTGCAAATGCTCTTCTGCCACCGCTGGCTGCTGCTGTGCTTCAAGCGGGAGTTTCCCGAGGCTGAGGCTCTGCGGATCTGGGAGGCCTGCTGGGCCCACTACCAGACGGATTACTTCCACCTTTTCATCTGTGTGGCCATTGTGGCCATCTACGGGGATGACGTCATTGAGCAGCATCTGGCCACCGACCAGATGCTTCTGCACTTTGGAAACCTGGCCATGCACATGAATGGGGAGCTTGTTCTCAGGAAGGCAAGGAGTTTACTCTATCAGTTTCGCCTCCTGCCGCGGATCCCCTGCAGCCTGCATGACCTGTGCAAGCTGTGTGGGAGTGGCATGTGGGACAGTGGTTACATGCCCGCCGTGGAGTGCACAGGCCAGCACCCGGGGTCTGAGAGCTGCCCATATGGGGGCACTGTGGAGACGCCTTCGCCCAAGCCCCCCAGAGAAGGCAGGAAGGGCCCAAAGACGCCCCGCGAAGGCTTCGGTTTCCGCAGATAG

Related Sequences

bmy_02286T0 Protein

Length: 514 aa      View alignments
>bmy_02286T0
MTCSTSSPSSVDAHLQFLDSSGLLQPPRWDEPQRACALEQICGVFRVDLGHMRSLRLFFSDEACTSGQLVVASRESQYKVFHFHHGGLDKLPDVLQQWKYCAETHLKDQQVADEKTCMQFSIRRPKLPSSETHPEESMYRRLDVAAWLRHLNALGQVEEEYKLRKAIFFGGIDVSIRGEVWPFLLRYYSHESTSEEREALRLQKRKEYAEIQQKRLSMTPEEHRAFWRNVQFTVDKDVVRTDRSNQFFRGEGNPNVESMRRILLNYAVYNPAIGYSQGMSDLVAPILAEVLDESDTFWCFVGLMQNTIFVSSPRDEDMEKQLLYLRELLRLTHLRFYQHLVSLGEDGLQMLFCHRWLLLCFKREFPEAEALRIWEACWAHYQTDYFHLFICVAIVAIYGDDVIEQHLATDQMLLHFGNLAMHMNGELVLRKARSLLYQFRLLPRIPCSLHDLCKLCGSGMWDSGYMPAVECTGQHPGSESCPYGGTVETPSPKPPREGRKGPKTPREGFGFRR*