Part of scaffold_59 (SequenceType object (1))

For more information consult the page for scaffold_59 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TBC1D16ENSTTRG00000000511 (Bottlenosed dolphin)

Gene Details

TBC1 domain family, member 16

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000478, Bottlenosed dolphin)

Protein Percentage 98.05%
cDNA percentage 97.99%
Ka/Ks Ratio 0.12574 (Ka = 0.0097, Ks = 0.0773)

TBC1D16ENSBTAG00000003192 (Cow)

Gene Details

TBC1 domain family member 16

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000004147, Cow)

Protein Percentage 96.49%
cDNA percentage 93.83%
Ka/Ks Ratio 0.055 (Ka = 0.0174, Ks = 0.317)

TBC1D16 (Minke Whale)

Gene Details

TBC1 domain family, member 16

External Links

Gene match (Identifier: BACU011589, Minke Whale)

Protein Percentage 16.11%
cDNA percentage 37.79%
Ka/Ks Ratio 0.07808 (Ka = 1.3214, Ks = 16.9241)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 1542 bp    Location:2241393..2252434   Strand:+
>bmy_02286
ATGACTTGCTCCACCAGCTCCCCCTCCAGCGTGGACGCCCACCTGCAGTTCCTGGACAGCAGTGGCCTCCTGCAGCCCCCGCGCTGGGACGAGCCGCAGCGGGCCTGCGCCTTGGAGCAGATCTGCGGTGTGTTCCGAGTGGACTTGGGTCACATGCGCTCCCTCCGCCTCTTCTTCAGCGATGAGGCCTGCACCAGCGGCCAGCTGGTCGTCGCCAGCCGGGAAAGCCAGTACAAGGTGTTCCACTTCCACCACGGTGGCCTGGACAAGCTGCCCGACGTGCTTCAGCAGTGGAAATACTGCGCAGAGACGCACCTCAAAGACCAGCAGGTCGCCGACGAAAAGACGTGCATGCAGTTCTCCATCCGGCGTCCCAAACTGCCCTCTTCCGAGACGCACCCCGAGGAGAGCATGTACCGACGGCTGGACGTCGCGGCCTGGCTCCGCCACCTGAACGCGCTGGGCCAGGTGGAGGAGGAGTACAAGCTCCGCAAGGCCATTTTCTTCGGCGGCATTGATGTGTCAATCCGGGGGGAGGTCTGGCCCTTCCTGCTGCGTTATTACAGCCACGAGTCGACGTCGGAGGAGAGGGAGGCGCTGCGGCTGCAGAAGAGAAAGGAATACGCCGAGATCCAGCAGAAAAGGCTCTCCATGACCCCTGAAGAGCACAGAGCGTTCTGGAGGAACGTGCAGTTCACCGTGGACAAGGATGTGGTACGGACAGATCGAAGCAACCAGTTCTTCCGAGGAGAAGGCAATCCCAATGTGGAGAGCATGAGGAGGATCCTGCTGAACTATGCGGTGTACAACCCAGCCATTGGCTACTCCCAGGGCATGTCAGACCTGGTGGCCCCCATCCTGGCCGAGGTCCTGGACGAGTCAGACACCTTCTGGTGCTTTGTGGGTTTGATGCAGAACACGATCTTTGTCAGCTCTCCTCGGGATGAGGACATGGAGAAACAGCTGCTGTACCTGCGGGAGCTGCTGCGGCTGACGCACCTGCGCTTCTACCAGCACCTGGTCTCGCTGGGCGAGGACGGCCTGCAAATGCTCTTCTGCCACCGCTGGCTGCTGCTGTGCTTCAAGCGGGAGTTTCCCGAGGCTGAGGCTCTGCGGATCTGGGAGGCCTGCTGGGCCCACTACCAGACGGATTACTTCCACCTTTTCATCTGTGTGGCCATTGTGGCCATCTACGGGGATGACGTCATTGAGCAGCATCTGGCCACCGACCAGATGCTTCTGCACTTTGGAAACCTGGCCATGCACATGAATGGGGAGCTTGTTCTCAGGAAGGCAAGGAGTTTACTCTATCAGTTTCGCCTCCTGCCGCGGATCCCCTGCAGCCTGCATGACCTGTGCAAGCTGTGTGGGAGTGGCATGTGGGACAGTGGTTACATGCCCGCCGTGGAGTGCACAGGCCAGCACCCGGGGTCTGAGAGCTGCCCATATGGGGGCACTGTGGAGACGCCTTCGCCCAAGCCCCCCAGAGAAGGCAGGAAGGGCCCAAAGACGCCCCGCGAAGGCTTCGGTTTCCGCAGATAG

Related Sequences

bmy_02286T0 SequenceType object (3)

Length: 514 aa      View alignments
>bmy_02286T0
MTCSTSSPSSVDAHLQFLDSSGLLQPPRWDEPQRACALEQICGVFRVDLGHMRSLRLFFSDEACTSGQLVVASRESQYKVFHFHHGGLDKLPDVLQQWKYCAETHLKDQQVADEKTCMQFSIRRPKLPSSETHPEESMYRRLDVAAWLRHLNALGQVEEEYKLRKAIFFGGIDVSIRGEVWPFLLRYYSHESTSEEREALRLQKRKEYAEIQQKRLSMTPEEHRAFWRNVQFTVDKDVVRTDRSNQFFRGEGNPNVESMRRILLNYAVYNPAIGYSQGMSDLVAPILAEVLDESDTFWCFVGLMQNTIFVSSPRDEDMEKQLLYLRELLRLTHLRFYQHLVSLGEDGLQMLFCHRWLLLCFKREFPEAEALRIWEACWAHYQTDYFHLFICVAIVAIYGDDVIEQHLATDQMLLHFGNLAMHMNGELVLRKARSLLYQFRLLPRIPCSLHDLCKLCGSGMWDSGYMPAVECTGQHPGSESCPYGGTVETPSPKPPREGRKGPKTPREGFGFRR*