Sequence detailsbmy_02287 (Coding sequence)

Part of scaffold_59 (SequenceType object (1))

For more information consult the page for scaffold_59 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CBX4ENSTTRG00000015488 (Bottlenosed dolphin)

Gene Details

chromobox homolog 4

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014664, Bottlenosed dolphin)

Protein Percentage 94.91%
cDNA percentage 94.06%
Ka/Ks Ratio 0.02418 (Ka = 0.0024, Ks = 0.101)

CBX4ENSBTAG00000009782 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000040225, Cow)

Protein Percentage 74.62%
cDNA percentage 77.59%
Ka/Ks Ratio 0.27951 (Ka = 0.2071, Ks = 0.741)

CBX4 (Minke Whale)

Gene Details

chromobox homolog 4

External Links

Gene match (Identifier: BACU011586, Minke Whale)

Protein Percentage 91.17%
cDNA percentage 91.79%
Ka/Ks Ratio 0.255 (Ka = 0.0247, Ks = 0.0969)

Additional orthologs identified in other species via the OPTIC pipeline.

CBX4 (Human)   Cbx4 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1599 bp    Location:2311533..2333702   Strand:+
Raw sequence 
>bmy_02287
ATGGGCTCCCCCAAGGAGAGCAGGGTGACAGATGGGGCTGAAGAGGAAGGGCTGGACAGCAGATATAACACGTGGGAACCCGAGGAGAACATCCTGGATCCCCGGCTGCTGATCGCCTTCCAGAACAGGGAACGGCAGGAGCAGCTGATGGGATATCGGAAGCGAGGGCCGAAGCCCAAACCACTGGTGGTGCAGGTACCTACCTTTGCCCGTCGTTCCAACGTGCTGACCGGACTCCAGGACTCCTCGGCTGACAACCGCGCCAAGCTGGAGCTGGGTGGTCAGGGCAAGGGCCAGGGGCACCAGTACGAGCTCAACAGCAAGAAGCACCACCAGTACCAGCCGCACAGCAAGGAGCGGGCGGGCAAGCCCCCACCGCCAGGCAAGAGCGGCAAATACTACTACCAGCTCAACAGCAAGAAGCACCACCCCTACCAGCCGGACCCCAAAATGTATGACCTGCAGTACCAGGGCAGCCACAAGGAGGCGCCCAGCCCCACCTGCCCGGACCTAGGCGCCAAGAGCCACCCGCCCGATAAGTGGGCCCACGGCGGGGGGGCCAAGGGCTACCTGGGAGCGGTGAAGCCCCTGGCCGGTGCGGTCGGGGCTCCAGGCAAGGGCTCCGAGAAGGGTCCCCCCAACGGGATGACGCCGGCCCCCAAGGAAGCGGTGACGGGCAACGGGATTGGGGGCAAGATGAAGATAGTCAAAAACAAGAACAAGAACGGACGCATCGTGATCGTGATGAGCAAGTACATGGAGAACGGCATGCAGGCGGTGAAGATCAAGTCAGGGGAGGCAGCCGAGGGCGAGGCGCGCTCCCCCAGCCACAAGAAGCGGGCTGCCGAGGAGCGTCACCCCCCGGCAGACAGGACTTTCAAAAAGGCCGCGGGGGCGGAGGAGAAGAAGGTGGAAACGCCCTCCAAGAGGAGGGAGGAGGAGGGGCCGGGGGCCGGGGACCTGCAGCCCCAGGAGGCCGGCTCCCGCAAGCTCTCCCCGACCAAGGAGGCCTTCGGCGAGCAGCCCTTGCAGCTCACCACCAAGCCTGACCTGCTGGCCTGGGACCCGCCCCGCGGCACACAGCCGCCCTCCCACCATCACCACCACCACCACCACCACCATCACCACGCCGTCGACCTAAATCTCTCCCACGCGCGCAAGCGCTGCCTCTCCGAGACCCACGGCGAGCGAGAGCCCTGCAAGAAGCGCCTGACAGCGCGCAGCATTAGCACCCCCACCTGCCTGGGGGGCAGCCCCACCGCCGAGCGCCCCGCGGACGTCCCCCCTGCCGCCGCCCTCCCGCAACCGGAGGTCATCCTGCTGGACTCAGACCTGGACGAGCCCATAGACTTGCGCTGCGTCAAGACGCGCGGTGAGGCCGGGGAGCCGCCCAGCGCCCTCCAGGTGAAGCCTGAGGCGCCCGCAACCGCGGCGGTGGCAGCTGAGCCGGCGACAGCGGCCGAGAAGCCTCCGACCGAGGCCCAGGACGAGCCCGAGGAGCCACTCAGCGAGTTCAAACCCTTCTTTGGGAATATAATTATCACCGACGTCACCGCAAACTGCCTCACCGTCACGTTCAAGGAGTACGTGACGGTGTAG

Related Sequences

bmy_02287T0 SequenceType object (3)

Length: 533 aa      View alignments
>bmy_02287T0
MGSPKESRVTDGAEEEGLDSRYNTWEPEENILDPRLLIAFQNRERQEQLMGYRKRGPKPKPLVVQVPTFARRSNVLTGLQDSSADNRAKLELGGQGKGQGHQYELNSKKHHQYQPHSKERAGKPPPPGKSGKYYYQLNSKKHHPYQPDPKMYDLQYQGSHKEAPSPTCPDLGAKSHPPDKWAHGGGAKGYLGAVKPLAGAVGAPGKGSEKGPPNGMTPAPKEAVTGNGIGGKMKIVKNKNKNGRIVIVMSKYMENGMQAVKIKSGEAAEGEARSPSHKKRAAEERHPPADRTFKKAAGAEEKKVETPSKRREEEGPGAGDLQPQEAGSRKLSPTKEAFGEQPLQLTTKPDLLAWDPPRGTQPPSHHHHHHHHHHHHAVDLNLSHARKRCLSETHGEREPCKKRLTARSISTPTCLGGSPTAERPADVPPAAALPQPEVILLDSDLDEPIDLRCVKTRGEAGEPPSALQVKPEAPATAAVAAEPATAAEKPPTEAQDEPEEPLSEFKPFFGNIIITDVTANCLTVTFKEYVTV*