Part of scaffold_62 (Scaffold)

For more information consult the page for scaffold_62 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PIGX ENSTTRG00000013892 (Bottlenosed dolphin)

Gene Details

phosphatidylinositol glycan anchor biosynthesis, class X

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013172, Bottlenosed dolphin)

Protein Percentage 94.09%
cDNA percentage 95.15%
Ka/Ks Ratio 0.61868 (Ka = 0.0085, Ks = 0.0137)

PIGX ENSBTAG00000048195 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000055862, Cow)

Protein Percentage 85.91%
cDNA percentage 88.33%
Ka/Ks Ratio 0.31814 (Ka = 0.0864, Ks = 0.2717)

PIGX  (Minke Whale)

Gene Details

phosphatidylinositol glycan anchor biosynthesis, class X

External Links

Gene match (Identifier: BACU003803, Minke Whale)

Protein Percentage 97.06%
cDNA percentage 97.88%
Ka/Ks Ratio 0.24697 (Ka = 0.0129, Ks = 0.0523)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 663 bp    Location:1094094..1064116   Strand:-
>bmy_02305
ATAAGGGCCACTTGTTCTGAAATTATTTTGAGGCAAGAAGTTTTGAAAGATGGTTTCCACAGAGACCTGTTAATAAAAGTGAAATTTGGAGAGAGCATTGAGGACTTACAGACCTGCCGACTCTTAATTAAACAGTACATCCCGACAGGACTTTTTGTGGATCCGTATGAGTTGTCTTCATTACGAGAGAGAAACATAACAGAGGCAGTGATGGTTTCAGAAAATTTTAATATAGAGGCTCCCAACTATTTGTCCAAGGAGTCTGAAGTTCTCATTTATGCCAGACAGGATTCACAGTGCATTGATTGTTTTCAAGCTTTTTTGCCTGTGCATTATCGCTATCATCGGCCACATAGTAAAGATGGAGAAACCTTTATTGTGCTCAATAACCCAGATTTATTGATGTATTGTGACCAAGAGTTTCCAATTTTGAAATGCTGGGCTCAGTCAGAAGTGACAGCTCCTTGTGCTTTGAACAGTAAGGATAACTGCCAATGGAACAATATGAAATATAAATCAGTATATAAGAATGCGAATCTACAGGTTCCAGTGGGACTGACCATACATACCTCTTTAGTATGTTCTGTGACTCTGTTTATTACCATCTTGTGTTCTACTTTAATCCTTGTGGCTGTTTTCAAATATGGCCATTTTTCCCTATGA

Related Sequences

bmy_02305T0 Protein

Length: 221 aa      View alignments
>bmy_02305T0
IRATCSEIILRQEVLKDGFHRDLLIKVKFGESIEDLQTCRLLIKQYIPTGLFVDPYELSSLRERNITEAVMVSENFNIEAPNYLSKESEVLIYARQDSQCIDCFQAFLPVHYRYHRPHSKDGETFIVLNNPDLLMYCDQEFPILKCWAQSEVTAPCALNSKDNCQWNNMKYKSVYKNANLQVPVGLTIHTSLVCSVTLFITILCSTLILVAVFKYGHFSL*