Sequence details bmy_02310 (Coding sequence)

Part of scaffold_62 (Scaffold)

For more information consult the page for scaffold_62 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SMCO1 ENSTTRG00000012710 (Bottlenosed dolphin)

Gene Details

single-pass membrane protein with coiled-coil domains 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012056, Bottlenosed dolphin)

Protein Percentage 96.53%
cDNA percentage 97.69%
Ka/Ks Ratio 0.47332 (Ka = 0.0177, Ks = 0.0374)

BT.60977 ENSBTAG00000013319 (Cow)

Gene Details

uncharacterized protein C3orf43 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017713, Cow)

Protein Percentage 87.5%
cDNA percentage 92.36%
Ka/Ks Ratio 0.60521 (Ka = 0.0695, Ks = 0.1149)

Additional orthologs identified in other species via the OPTIC pipeline.

SMCO1 (Human)   Smco1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 435 bp    Location:1276220..1282006   Strand:+
Raw sequence 
>bmy_02310
ATGGAATTGAATATTTTATACAGCTACGTCATTGAAGTACTCATCCGCTTGCACACTCGTGTGCTTGAGAAGCTGCCAGATCTGGTGAGAGGTCTTCCCACCTTAGCCTCCATCCTTAGACGAAAAGTCAAGAACAAGCGCATTAGAGTTGTGTGGGAGTCTGTCCTGGAGGAGCATGGGATGCAAGAAGGAGATATCACAGCACTGTGTACCTTCTTTGTAGCACATGGTAACAAGGCAGAATACTACATTGCTAAAGTAAGGCAAATGTATGTAAAAGATGTCAATTTCATGATCACTAATATGGTAAAGAACCAGGCTCTGCAGGATGGCTTGCTAAAGGCTGTTCAGGTCATTGAGAAGGGAAAAGCAGTGAGGGCCCCTGCAGAGCAAAAGTCATCCCTAGAAGAGTTGATACCATCAGCCAAAAGCTAA

Related Sequences

bmy_02310T0 Protein

Length: 145 aa      View alignments
>bmy_02310T0
MELNILYSYVIEVLIRLHTRVLEKLPDLVRGLPTLASILRRKVKNKRIRVVWESVLEEHGMQEGDITALCTFFVAHGNKAEYYIAKVRQMYVKDVNFMITNMVKNQALQDGLLKAVQVIEKGKAVRAPAEQKSSLEELIPSAKS*